| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1403 |
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| Symbol | |
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| ID | 6183645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1201038 |
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| End bp | 1202615 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671946 |
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| Product | alkyl hydroperoxide reductase, F subunit |
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| Protein accession | YP_001798119 |
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| Protein GI | 171464006 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATA CCAACATCAA ATCTCAATTA AAAGTATATT TTGAAAAGAT TGTTAGTCCC
ATCGCTCTCG TTGCAAGCCT AAATGACAGC GACAGCTCCA AGCAAATGCT TGAGCTTTTA
AACGAAGTAG CTGAGCAATC CGATAAGATC ACTGTTAAAA CAGATGGCAA GGCTGCCCGT
ACTCCTAGCT TTACTGTTGG CAAAGTAGAT CAGGAGGCGC GCATTACTTT CGCCGGCCTA
CCAATGGGTC ATGAAATGAC TTCTTTCATT CTGGCTATTT TGCAAGCAAG TGGTTATCCG
GCAAAAGTAG AGCAAGAAAT AATAGAACGC ATTACCAATC TAGAAGGCAA GCGAAGCTTC
CAAACATTTA TTTCCTTGCC ATGCCATAAC TGCCCAGATG TTGTACGGGC GCTGAATTTG
ATGGCAGCTC TAAACCCAAA TATCACTCAC GAGATGGTTG ATGGCGCACT TTACCAAGAG
CTAGTAGATC AATTCCAAAT CATGGCAGTC CCAACAGTCA TCCTCAATGG CGAGGTATTT
GGTCAAGGCC GCATGAGTGT TGAAGAAATT GTTGCCAAAC TAGATAACTC AAGCCCCAAA
GAAGAAGCTG CAAAACTGTC TGCCAAAGAT CCGTTTGGTG TTTTGGTGAT TGGTGGCGCT
CCTGCGGGCT CCGCTGCAGC TATCTATGCA GCACGTAAAG GCATTCGCAC CGGCATTGTG
GCTGAGCGAT TTGGCGGTCA AGTGATGGAC ACCATGGGCA TTGAAAACTT TATCTCCGTT
AAAGAGACCG AGGGGCCTAA GTTAGTCCAA GCACTTGAGC AGCACGTGAA GAGCTATGCA
GTCGATATTA TGAATTTGCA ACGTGCAAAC GCATTACGAA AAACAGCCGG TGGTGTTGAG
GTGGAGTTAG CCAATGGCGT AGCTCTCACC AGCAAGTCTG TGATTTTGAG TACTGGTGCT
CGCTGGAGAG AGATGAATGT TCCAGGCGAG CAAGAGTATC GCGGCAAAGG GGTGGCCTAC
TGCCCTCATT GCGATGGTCC GCTATTTAAA GGCAAACGAG TTGCAGTGAT TGGTGGCGGA
AACTCTGGCG TAGAGGCCGC AATTGATTTG GCGGGCATTG TGAGCCACGT CACTCTGATT
GAGTTTGATA GCAAACTGCG TGCCGATGCA GTGTTGCAAA AGAAAATGGC CAGTATGCCA
AACGTCACCG TCATCATGAG TGCACTCACT AAAGAAGTAT TGGGTGCAGA CGGCAAGGTC
AGCGGCCTAC GCTATCAAGA CCGTACGAAT AATACTGAGC ATGCGATTGA ACTTGAAGGG
ATCTTTGTGC AAATTGGGTT ATTGCCAAAC ACCGACTGGC TCAAAGGAAC TATCGACTTA
TCCAAGCACG GTGAAGTTAT TGTCGATGCA AAAGGAGAAA CCTCTTTGCC CGGGGTATTT
GCAGCTGGAG ATTGCACTAC CGTTCCCTAC AAGCAAATCA TTATTGCAAT GGGCGAAGGC
GCTAAAGCTT CACTCGGCGC ATTTGACTAC CTGATTCGCT CATCCGTTGT CGAGCCTGAG
GAAGCAGTTG CTGCTTAA
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| Protein sequence | MLDTNIKSQL KVYFEKIVSP IALVASLNDS DSSKQMLELL NEVAEQSDKI TVKTDGKAAR
TPSFTVGKVD QEARITFAGL PMGHEMTSFI LAILQASGYP AKVEQEIIER ITNLEGKRSF
QTFISLPCHN CPDVVRALNL MAALNPNITH EMVDGALYQE LVDQFQIMAV PTVILNGEVF
GQGRMSVEEI VAKLDNSSPK EEAAKLSAKD PFGVLVIGGA PAGSAAAIYA ARKGIRTGIV
AERFGGQVMD TMGIENFISV KETEGPKLVQ ALEQHVKSYA VDIMNLQRAN ALRKTAGGVE
VELANGVALT SKSVILSTGA RWREMNVPGE QEYRGKGVAY CPHCDGPLFK GKRVAVIGGG
NSGVEAAIDL AGIVSHVTLI EFDSKLRADA VLQKKMASMP NVTVIMSALT KEVLGADGKV
SGLRYQDRTN NTEHAIELEG IFVQIGLLPN TDWLKGTIDL SKHGEVIVDA KGETSLPGVF
AAGDCTTVPY KQIIIAMGEG AKASLGAFDY LIRSSVVEPE EAVAA
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