| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1397 |
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| Symbol | |
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| ID | 6183054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1197216 |
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| End bp | 1197893 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671942 |
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| Product | protein of unknown function DUF1345 |
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| Protein accession | YP_001798115 |
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| Protein GI | 171464002 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4291] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.79263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCAT CCCCTTGGAT ACAATACTGG CACCAAATCG GCGCCACTCA CAGACTGCTC
ATCGTTGCAA TCACCGGACT TGGATCCTAT TTCCTGCTTC CAACTGATTT GTCTGCAATT
GTCCGTCTAG CCTTATCTTG GTTACTCGCA GGGGGCCTTT ATCTAGCCAT GGCTTATATC
ATGATGTACT TTGCCAAAAA AGAAAACATG CTTGATCTTT CTAAAAAAGA GGATGACGGT
GCAGCGATGA TTCTATTGAT CATAGTGCTT GCCTCGATAG CTAGCCTAAT AACGATTGTG
ATCATTCTCT CAGACATCAA AACACTTCCC AGCAATCTTG CGGCTCGACA CATTGGATTG
GTTTTGGCAA CTTATATTGT TTCTTGGCTA TATGTACACA CCGCATTTGC CCTGCACTAC
GCACACGTCT ACTACCAAGA GTTTGAAACA AATAAAGAGG CGCCCTTGTT ATTTGCCTCT
GATTTAAAGC CTGCCTACGT AGACTTTCTT TACTTTTCGA TGGTGATTGG CATAACCTGC
CAAACGGCTG ACGTCAATAT TGCCAGCTCC AGGATGCGCT TTTTAGTCAT GATTCAGGGT
ATGATCGCTT TTGTGTTTAA CGCCTCTTTG CTTGCTCTGG CGATCAACCT CATTTCAGGG
GTTGTGGCCC TAACCTGA
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| Protein sequence | MNASPWIQYW HQIGATHRLL IVAITGLGSY FLLPTDLSAI VRLALSWLLA GGLYLAMAYI
MMYFAKKENM LDLSKKEDDG AAMILLIIVL ASIASLITIV IILSDIKTLP SNLAARHIGL
VLATYIVSWL YVHTAFALHY AHVYYQEFET NKEAPLLFAS DLKPAYVDFL YFSMVIGITC
QTADVNIASS RMRFLVMIQG MIAFVFNASL LALAINLISG VVALT
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