Gene Pnec_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1394 
Symbol 
ID6183542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1195552 
End bp1196019 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content43% 
IMG OID641671939 
Producthypothetical protein 
Protein accessionYP_001798112 
Protein GI171463999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.887957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTG CGCAAGCAAT TGCGCAGATT AATCAACAGG CCACCCAAGA ATTGGCCGGG 
TTGATTCAGA AAAGAGTATC TGAGTTGATG AAAACCCAAG ATCCTAAATC TGCTTTTGAA
TACGTGCACG CCGAAGTATT GCAAGATGCC GCTAAGGAGG TTGCTCAATA TCACAATCAG
CTATTGCAAG TATTGAAAAA TGGCAATCAG GAGCTTGCTG ATATCGCAGA AACCATGATT
CAAGAGTCTA AAGCCGATCT TATTCACTTT GTGAATGAAG CTACTGATAA TGCGCCGCTT
GGCAGTGAGG CTTATGTCTC GGTATTTAAG ACCTCATTTA GCTCTGCGTT GCAAAATTTC
GAATTGATTC GTGCCGCAAT GGCTGATTCA TTTGCGAACT TTGAAAAGAG TGTTGAGAAC
GTTGGCAACC TTGCAAGTCC GAAAGCAAGC CCAAAAAAGA AAGCTTGA
 
Protein sequence
MESAQAIAQI NQQATQELAG LIQKRVSELM KTQDPKSAFE YVHAEVLQDA AKEVAQYHNQ 
LLQVLKNGNQ ELADIAETMI QESKADLIHF VNEATDNAPL GSEAYVSVFK TSFSSALQNF
ELIRAAMADS FANFEKSVEN VGNLASPKAS PKKKA