Gene Pnec_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1388 
Symbol 
ID6183539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1193126 
End bp1193455 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content45% 
IMG OID641671933 
Productbeta-lactamase domain protein 
Protein accessionYP_001798106 
Protein GI171463993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAA ATGATTTAGC AGCTATTGGT CCTATTGATG TGTTGCTGGT GACGCATGCA 
CACGTAGATC ACATTGGTGA TGCACCGGCT GTGGCTAAGA TGAATAGAAT TAAATTGTAT 
GGCCCGGCAG ATATGGTTAC GCCTTTAACT ACGTTGCGTA TATTGCCGGC TGATTTGGGT 
CATCGCTTCA ATAAAACGGG AAGAGTTACC CCAGCGCCTG GCATTAAGGT GACAGCTGTA 
CAGACAGAGC ATTCATTATT ATCGGTTTGG AAAAATCCTG CGATGGACAA GATGGAGTCT 
CATCCTGCTG GCGAGTCTGA AAACCCCTAG
 
Protein sequence
MYKNDLAAIG PIDVLLVTHA HVDHIGDAPA VAKMNRIKLY GPADMVTPLT TLRILPADLG 
HRFNKTGRVT PAPGIKVTAV QTEHSLLSVW KNPAMDKMES HPAGESENP