Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1387 |
Symbol | |
ID | 6183493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1192600 |
End bp | 1193028 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641671932 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_001798105 |
Protein GI | 171463992 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAA TGAACTTTTT ACCAACCCTA AGAAGCTTAA TTTCTGCGTA TCAATCATTT GAGCGATATT CGGCGCCAGA CGTTAAGGCG ATGGGATTGA CTACCACTCA GTTTGACGTG ATTGCCACCT TGGGTAATCA GCCACCTATG ACCTGCAAGG AGTTGGGTGA AAAAACTTTG GTTACAAAAG GTACTCTTAC GGGCGTGCTT GAGCGTCTTG AGGCAAAAGG AATTCTAGAG CGCAAGTTAA ATCCAGAAGA TGCTCGCAGC CAAATGATCA GCCTTACTCT TGACGGGCAG GCATTGTTTG AAAAAGTATT TCCCGCCCAT CTTCGTCACT TAGAAAAAGC ATTTTCAAAA TTGTCTGATA AAGAATTGAC GGAAGTGACT AAGTCGTTGC AGGCCATCAA CACTATTTTT TCAAATTAA
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Protein sequence | MTKMNFLPTL RSLISAYQSF ERYSAPDVKA MGLTTTQFDV IATLGNQPPM TCKELGEKTL VTKGTLTGVL ERLEAKGILE RKLNPEDARS QMISLTLDGQ ALFEKVFPAH LRHLEKAFSK LSDKELTEVT KSLQAINTIF SN
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