Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1386 |
Symbol | |
ID | 6183409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1192163 |
End bp | 1192576 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641671931 |
Product | DoxX family protein |
Protein accession | YP_001798104 |
Protein GI | 171463991 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.42391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTAA TGTCTAAACC TTTAACATTG GTTGCCAGAA TTTTGATGGC ATCTATTTTT ATATCAGCCG GCTTTTCCAA AGTTTTGGGA TTCGATGGGG TTACTGCGTA TATTGCCTCT AAAGGTTTGC CGTTGCTAAT GGTTATTGCT GGCCTTACTG TTGCCCTTGA AATTCTCGGT GGTATTGCCA TCATTGTTGG CTTTAAGGCT CGTATCGCAG GTCTACTTCT AGGCTTATTT TCTATCCTGG CAGCCTTTAT ATTCCATAAC TTCTGGGCAT TTCCTCCAGA GCAAGTCTAT CTCCAAAATA TTATGTTTAT GAAGAATCTC AGCATAGCAG GCGGTTTATT TTTATTGGCG GTCTTTGGGC CTGGTGGGTA TTTAATTGAT GGCAGAAATA CAGTCAAGAA ATAA
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Protein sequence | MSLMSKPLTL VARILMASIF ISAGFSKVLG FDGVTAYIAS KGLPLLMVIA GLTVALEILG GIAIIVGFKA RIAGLLLGLF SILAAFIFHN FWAFPPEQVY LQNIMFMKNL SIAGGLFLLA VFGPGGYLID GRNTVKK
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