| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1381 |
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| Symbol | |
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| ID | 6183529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1189380 |
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| End bp | 1190150 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671928 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_001798101 |
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| Protein GI | 171463988 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGG TAAATCATTT TTCTAGCCAC CGCTTAATTA ATTGGTTTAA GTTATCTAGC
CCCAGCACCT TTTATCCGGT GGCGGGTAAG CTCATCCCTT TCTTTTGGGT GTTGACATTT
CTATTTGGTG CTGCTGGTTT GTGGATCAGT TTTTTTGTTG CGCCAGTTGA TGCCGTTCAG
GGGCAGGGAT ATCGCATTAT TTTTATTCAT GTGCCCGCTT CATGGATATC GATGTTCATC
TATTTGGTGA TGGCTGCATG GGCAGGGCTC GGATTAGTCT TTAATACGCG CTTGTCTGCC
ATGATGGCGC AAGCTCTTGC TCCAATAGGT GCTTGGATGG CGTTTCTGTC TTTGTGGTCC
GGAGCTTTTT GGGGCAAGCC AATGTGGGGT GCGTGGTGGG TGTGGGATGC ACGCCTTACT
TCAGAGTTGA TCCTCTTGTT TCTCTACTTA GGCTTTATTG CCTTGCGAGC CTCTATTGAT
GATCCACGTC GGGCCGATAA GGCTAGCGCC ATTTTGGCTT TGGTAGGTGT AGTCAATGTG
CCTATTATTT ATTTTTCAGT GAAATGGTGG AATACCTTGC ATCAAGGGGC ATCAGTTTCC
TTGACTAAAG CGCCGGCGAT GGCCCAAACC ATGCTTTTGG GTATGCTTTT AATGGCTCTG
TGCTTTTGGA TGTACACCAT TGCTGTTGCC TTAATGCGAG TGAGGGCAAT CATATTGGAG
CGTGAAGCCC ATGCGGATTG GGTGAGACAA TCTATTGAGG TGAAAAGCTG A
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| Protein sequence | MNQVNHFSSH RLINWFKLSS PSTFYPVAGK LIPFFWVLTF LFGAAGLWIS FFVAPVDAVQ
GQGYRIIFIH VPASWISMFI YLVMAAWAGL GLVFNTRLSA MMAQALAPIG AWMAFLSLWS
GAFWGKPMWG AWWVWDARLT SELILLFLYL GFIALRASID DPRRADKASA ILALVGVVNV
PIIYFSVKWW NTLHQGASVS LTKAPAMAQT MLLGMLLMAL CFWMYTIAVA LMRVRAIILE
REAHADWVRQ SIEVKS
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