Gene Pnec_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1376 
Symbol 
ID6183161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1185851 
End bp1186324 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content44% 
IMG OID641671923 
Productcytochrome C biogenesis protein 
Protein accessionYP_001798096 
Protein GI171463983 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGC AGATTATTCT GATGGGATTC ATTGCTTTAA GTCTGGGTAG CGTATTTGCC 
AAAGATGCCG CACCTCTCGC AGATGATCCT GTAACAGAAC AAAGACTTAT TAGTATTTCA
GAGGAGATGC GTTGCCTAGT TTGTCAGAAC GAATCTTTAG CTGGCTCACG TTCTGATTTG
GCTAATGACT TGCGCCGTGA AATTCGGGAT CTGATTCATG AAGGCAAAAG CGATGATCAA
ATTCGATCAT TCATGGTGGA GCGTTACGGC GATTTTGTAC TCTATCGCCC ACCAGTGAAG
CCTATAACCT GGCTGCTTTG GATTGGACCT TTTGCCATCT TGGGCATTGG TATTGCTGGG
CTCTTAATGT ATTTACGACG TCGCAATAGT GCCATCCCTA CTGTCACGCT GACGGATGCA
GACAATCAGA AAATTGATGC ACTATTAAAT GCAGCAGACA AAAAAGAAGG ATGA
 
Protein sequence
MMKQIILMGF IALSLGSVFA KDAAPLADDP VTEQRLISIS EEMRCLVCQN ESLAGSRSDL 
ANDLRREIRD LIHEGKSDDQ IRSFMVERYG DFVLYRPPVK PITWLLWIGP FAILGIGIAG
LLMYLRRRNS AIPTVTLTDA DNQKIDALLN AADKKEG