| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1362 |
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| Symbol | |
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| ID | 6182923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1173768 |
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| End bp | 1174415 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671914 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_001798087 |
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| Protein GI | 171463974 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.31781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAC AGCGTCGATT TTTTTCCCAC GAAACGCTTG AGCGTAATGT TGGATGGCTG
ATTATTGCTA CTATCGCTGC AATTTCAATT GCAGGTCTTG TGCAGATCGT TCCATTGTTT
TTCCAACACT CAACTACTGA ACCTAGTCCA GGTGTTGAGC CATACTCCGC TTTGCGTTTA
GCTGGTCGCG ATATCTATCA ACGTGAGGGG TGCTTAGGTT GCCATTCACA ACAGATTCGT
ACTCTACGCT CAGAAGTAGA GCGTTACGGC CCTTACTCTT TGGCTGGTGA GTCTGTATTT
GATCACCCTT TCCTTTGGGG TAGTAAGCGT ACTGGGCCAG ATTTGGCTCG TGTGGGCGGT
CGCTATTCAG ATGATTGGCA TCGCATTCAC TTGCGCAACC CGCGTAACGT TGTGCCAGAG
TCCAATATGC CTGCATATCC CTATTTGCAA AAGCCAGCTG CTGCTGACAC GATTTCATCT
CATATGGTTG CTATGCGTCG CTTAGGTGTT CCATACACTG ATGAGCAGAT TACGAATGCG
CCAAAAGAGT TGGAAGGTAA AATCGAAGAA GATGCGTTGA TTGCATACCT TCAAGGTCTT
GGCGTAAATC GTCGATACAT TATTGTTGAT GAGGTTGTTG CTAAGTAA
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| Protein sequence | MSEQRRFFSH ETLERNVGWL IIATIAAISI AGLVQIVPLF FQHSTTEPSP GVEPYSALRL
AGRDIYQREG CLGCHSQQIR TLRSEVERYG PYSLAGESVF DHPFLWGSKR TGPDLARVGG
RYSDDWHRIH LRNPRNVVPE SNMPAYPYLQ KPAAADTISS HMVAMRRLGV PYTDEQITNA
PKELEGKIEE DALIAYLQGL GVNRRYIIVD EVVAK
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