| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1355 |
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| Symbol | |
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| ID | 6183713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1169137 |
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| End bp | 1169856 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641671907 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001798080 |
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| Protein GI | 171463967 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2836] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0550104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAACAA CAAGTCTGCT GATTGCCGTG TTTTTGGGGG CTCTTGTGAG TGGTTGGCAC
TGCGCCTTGA TGTGCGGCGG TATAGCAGCT GCCATTGAGC GGCCCGCCGC CTTGGAGGCC
CCTTTAATGC CTAAATCAGA GCTTTTTTAC CTGCAGTTCA TTATGCATTT AGGTCGCATT
GCGACCTATG TTCTTCTGGG GGCTTTAGCC GCCGCCGTGG GGGTTGTGGT TTGGCAGCAA
AACTTGATCC CGATCCAGCG CCCCCTGTTT GCTCTGACCT CGCTGATTTT GATAATGATG
GGGCTTCGCC TGCTCAGGTT GGGTAAGTCT GAGGGCTTAC TTGGTGGTAA ATGGCTGAGC
GCAAAAATTG CTTCCTACTG GGCCAAATAC TTAGGTCGTA TGGCAAGCGG CCCTTCACGT
TGGTTTAGCG GCATGCTTTG GGGTTTAGCA CCCTGCGGTT TGGTTTATAG CGTCTTGCCG
CTCGCCTTTT TGTCGGGGGA TGTTCTTACT GGTGCGGCGC TGATGTTGGC ATTTGGTTTG
GGTACCTTAC CCAATTTGTT GTTGATCTCT AAATTTTCTG CAGCACTTAC TCAGTTTGGG
CAATCTATGT GGGTACGATA TTTAGCCACC ACACTGTTGC TGATTGCTGG CGGTTTTGGT
TTGTATTGTG CTTGGGTTTT GCCAGAAGCT TTATTAAAAG GCGGCTTCTG TATTTCTTAA
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| Protein sequence | MLTTSLLIAV FLGALVSGWH CALMCGGIAA AIERPAALEA PLMPKSELFY LQFIMHLGRI
ATYVLLGALA AAVGVVVWQQ NLIPIQRPLF ALTSLILIMM GLRLLRLGKS EGLLGGKWLS
AKIASYWAKY LGRMASGPSR WFSGMLWGLA PCGLVYSVLP LAFLSGDVLT GAALMLAFGL
GTLPNLLLIS KFSAALTQFG QSMWVRYLAT TLLLIAGGFG LYCAWVLPEA LLKGGFCIS
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