Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1340 |
Symbol | |
ID | 6183589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 1155616 |
End bp | 1156068 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641671897 |
Product | cytochrome c prime |
Protein accession | YP_001798070 |
Protein GI | 171463957 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0000000194758 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACCAC AAAAATTGGT TTTAGCAAGT ACCGCAACTG TTTTAACACT AGGCGCAGGT GTAACTTTTG CACAATTTCA AAAACCAGAA GATGCCATTA AATATCGTCA AAGCGCATTT ACAGTAATGG CAAATTCTTT TGGCAAAATT GGTGCAGTTG TGAAAGGCGA AGCGCCTTAC AACAAAGATG AAGTTGCCAA GAATGCTGCG ATCGTTGCAA TGATGTCCGC ACTGCCATGG CAAGCATTTG ACCCTGGCAC TGAAGATGGT AAAGCCAAAT CTGATGTTTG GTCGGACAGC GCTAAGTTCA AATCTGCCTC AGAAAAAATG CAGCTGGCTG TAGCCAATCT CAATACCGCA GCCCAATCCG GTGATTTGGA GAGCATTAAG AAAACTTTTG GGGCTGCCGG CGCAACCTGC AAGGGCTGCC ATGATGATTT TAAAAAGAAG TGA
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Protein sequence | MKPQKLVLAS TATVLTLGAG VTFAQFQKPE DAIKYRQSAF TVMANSFGKI GAVVKGEAPY NKDEVAKNAA IVAMMSALPW QAFDPGTEDG KAKSDVWSDS AKFKSASEKM QLAVANLNTA AQSGDLESIK KTFGAAGATC KGCHDDFKKK
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