Gene Pnec_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1333 
Symbol 
ID6183520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1151957 
End bp1152172 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content46% 
IMG OID641671890 
Productchromate transporter 
Protein accessionYP_001798063 
Protein GI171463950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.989506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000000000864753 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGTCA CACTCATTGG CTGGAATGTA GGGGGAATCA TTGGCGCATT AGTTGCTACC 
CTGGCAATTA CCTGGCCATC CTCCATCATG ATTTACTTCT TGCAGCGCTC TATTTTGGGC 
ATGCATGATA TTCAAAAGCA GAAGATAATT CAAGCAGCGG CTGGTGTACT GGCAGTTGGC 
TTAGTGCTAT CTGTGGGGTA TCGCACTTCA AATTAA
 
Protein sequence
MTVTLIGWNV GGIIGALVAT LAITWPSSIM IYFLQRSILG MHDIQKQKII QAAAGVLAVG 
LVLSVGYRTS N