| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1320 |
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| Symbol | |
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| ID | 6183390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1144542 |
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| End bp | 1144913 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641671881 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001798054 |
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| Protein GI | 171463941 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000153469 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 2.74516e-22 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGACCCTA AAAATCCAGA GATCTGGCTT AACTACGGCA GAAGTTTGGA TAATCTTCGA
AAACGTGAGG AAGCCCTAGC TTGTTATGAA AAAGCGGTTG AATTGCAACC CAATATGACC
GAGGGATGGT TCAATAAAGG AAAAATTTTT GGTGAGCTAA AGCGCTATGA AGAAGCTTTG
TATTCTTATA TCACCGCTTA CCAGTTACGA CCGTCTGAAC CCTTTTTACT GGGTATTATC
TTGCACTACA AAATGCTCAT TTGTGATTGG GTGGATTTGG AGGGCATGTA TCTAAAAGTG
CAGCAGGATC TGCATGCTCA TCAGATGGTG GCCGAGCCTT TTGGGTTTCA AGGGATTTCC
ACTTTCGAGT AA
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| Protein sequence | MDPKNPEIWL NYGRSLDNLR KREEALACYE KAVELQPNMT EGWFNKGKIF GELKRYEEAL
YSYITAYQLR PSEPFLLGII LHYKMLICDW VDLEGMYLKV QQDLHAHQMV AEPFGFQGIS
TFE
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