| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1313 |
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| Symbol | |
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| ID | 6183925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1136070 |
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| End bp | 1137149 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671874 |
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| Product | chorismate mutase |
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| Protein accession | YP_001798047 |
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| Protein GI | 171463934 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 2.21838e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGCTG AAGAGCAGCG CTTAGCCCCC TTGCGGGAAA AGATTGATAC GCTCGATGCG
CAAATTTTAG ATTTGTTAAC TCAGCGCGTT AAAGTTGCGC AGGAAGTGGG GCATATTAAA
GGCGGTTTCT TCTCGCCAGT GTTTCGTCCT GAGCGTGAGC GTCAGGTGGT GGCTCGTTTA
CAAGAAATTA ATCAAGGTCC TTTGCTTGCC GACGGTATTG TCGCCATTTG GCGCGAAGTG
ATGTCTGCAT GTCGAGCCTT AGAGGCTCGT CAAACAATTG CCTATCTTGG TCCCGTTGGC
ACTTTTTCTG AGCAAGCTGC TCAAACCTAT TTTGGACACT CGATTGCAGG ATTGCCTTGC
GCAAACTTGG ATGAAGTATT TAAGGCGGTA GAGAAGGGTG CAGCCCAATT TGGTGTTGTG
CCAGCAGAGA ACTCCAGTGA AGGTGCAATT TCTCGCACAT TGGATTTATT GCTCGACTCT
TCTATGCGCA TTAGCGGTGA AGTTGTTTTG CCTATTCGTC ATCATCTCTT AACCAAGAGT
GGAAATTTAG ATGGTGTGAC AACGGTCTGT GCTCATGCTC AAGCATTGGC TCAGTGCCAG
CAGTGGTTGA GCATTCATGC GCCACAGCTT AAGCGCCAAG CGGTTAGTAG CAATGCAGAA
GCGGCTCGCA TGGCAGCTGC TGATTCAAAC TTAGCTGCAA TTGCTGGAGA TCCTGCGCAA
GAAGCATATG GTCTGCAGGC TGTAGCTGCA CGGATTCAGG ATGATCCTCA CAACCGCACT
CGTTTTGTGG TGGTGGGTAA CTATGCCTGT CAATCAACTG GTAAAGATCA AACCTCGCTG
GTGCTCTCAG TAGGTAACCA ACCTGGCGCT GTACATCGTC TACTTGCGCC TTTAGCGAAG
CATGGCGTTT CTATGAATCG CTTTGAGTCT CGACCTGCGC GTAAGGGCAC ATGGGAGTAT
CACTTTTATA TTGATATTGC CGGTCATACA GATGATGACA AGGTTGCTAA GGCACTTGAG
GAGTTGAAGG GTGTTGCTGC TTTTTATAAG AACCTCGGCT CTTACCCACA CTCTGCGTAA
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| Protein sequence | MSAEEQRLAP LREKIDTLDA QILDLLTQRV KVAQEVGHIK GGFFSPVFRP ERERQVVARL
QEINQGPLLA DGIVAIWREV MSACRALEAR QTIAYLGPVG TFSEQAAQTY FGHSIAGLPC
ANLDEVFKAV EKGAAQFGVV PAENSSEGAI SRTLDLLLDS SMRISGEVVL PIRHHLLTKS
GNLDGVTTVC AHAQALAQCQ QWLSIHAPQL KRQAVSSNAE AARMAAADSN LAAIAGDPAQ
EAYGLQAVAA RIQDDPHNRT RFVVVGNYAC QSTGKDQTSL VLSVGNQPGA VHRLLAPLAK
HGVSMNRFES RPARKGTWEY HFYIDIAGHT DDDKVAKALE ELKGVAAFYK NLGSYPHSA
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