| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1311 |
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| Symbol | |
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| ID | 6183821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1134000 |
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| End bp | 1134881 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671872 |
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| Product | Prephenate dehydrogenase |
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| Protein accession | YP_001798045 |
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| Protein GI | 171463932 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0000000000231 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCATCA TTAATCCAGC AAGCAATTAC GGAACAGTCG CTATCGTTGG CGTTGGTTTG
ATTGGTGCAT CCTTGGGTTT AGCGCTTAAA AAAGCTGGCG TGGTCACTAA AGTTTTGGGC
GTTGGTCGTA GCAAGGAAAA TTTAGATCAA GCGCAAAAGA TGGGTGCGAT TGATGGTGTA
CTGGATTTGG TTGAAGTCGC CAAGCAATCT GATGTGATTG TGTTATGCGT TCCGGTTGCG
CAAATGCGAG CAGCTTTCGA AGTGATCGAG CCGCACCTTG AGTCTCGCAC CATGATTACC
GATGCGGGTA GCACCAAAGG CGATGTCATT TTGGCGGCAA AAGAAGTATT GGGTAAAAAA
GCCTGCCAAT TTGTGCCGGC ACACCCAATA GCGGGCGGCG CCCAGCACGG AGCTAGTGCG
GCTAAGGCGG ATTTATTTCA AGGCAAGCAA ACTATTATTT GCCCGCCTCA AGAAAACTCA
CCTGAAGATG TAGCGTTAAT TACTGGTTTC TGGGAATCTG TTGGCTCTGA AGTAAAAAAG
ATTGGCGTCG TTCAGCACGA TGCGATTTAT GCGGCGGTAT CGCATCTTCC ACATATCCTT
TCTTATGCAT TAATGGCCAG TGTCGTGAAC TCTGAGGATG CCGATCAAAA GTTGAGCCAT
GTTGGTGCTG GCTTTAAGGA TTTCACGCGC ATTGCTGCAT CAAGTCCAGA AATGTGGCGT
GATATTTGCC TCGGTAATCG CACAGCCATT CTGAAAGAAT TAGATCAGTA CCGATTGATC
GTTAATCATC TGCGCAAACT CATTGCTGAA AACAATGGTG CTGGAATTGA AAAATTATTT
AATAAGGCGA GCAAAGCACG TCAAGATTTG GATGTGCTTT GA
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| Protein sequence | MTIINPASNY GTVAIVGVGL IGASLGLALK KAGVVTKVLG VGRSKENLDQ AQKMGAIDGV
LDLVEVAKQS DVIVLCVPVA QMRAAFEVIE PHLESRTMIT DAGSTKGDVI LAAKEVLGKK
ACQFVPAHPI AGGAQHGASA AKADLFQGKQ TIICPPQENS PEDVALITGF WESVGSEVKK
IGVVQHDAIY AAVSHLPHIL SYALMASVVN SEDADQKLSH VGAGFKDFTR IAASSPEMWR
DICLGNRTAI LKELDQYRLI VNHLRKLIAE NNGAGIEKLF NKASKARQDL DVL
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