| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1304 |
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| Symbol | |
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| ID | 6183890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1126152 |
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| End bp | 1127081 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671865 |
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| Product | rfaE bifunctional protein |
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| Protein accession | YP_001798038 |
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| Protein GI | 171463925 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR02198] rfaE bifunctional protein, domain I |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.000191104 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAAG CAAACCGAGA TCAATTCTCT AAAGCCCGCC TACTGGTTGT AGGTGATGTG
ATGCTGGATC GCTACTGGTT TGGCGACACC AATCGCATTT CTCCAGAGGC TCCTGTGCCA
GTAGTGCAAG TTGGTAAGAT TGATGAGTGC CTTGGTGGTG CCGCCAACGT TGCTCGTAAC
GTTGCTGCGC TCGATGCAAA GGCAACTATC CTCGGTATCG TTGGTAATGA TGAGCCAGGC
AAGCGTGTGG TCGAGTTGTT AAAAGCCGGT GGCGTCGATA GCCAGTTGGA AATTGATGCT
GATGTCCCTA CGATTGTGAA GTTGCGTGTC ATTGCTCGTC AGCAACAATT AATCCGTTTG
GATTTTGAAG AAACTCCCAG TGCAAAGGCG CTGGCTCACA AGTTAGAGCG TTTTGAAAAA
CTCGTTGGCG ATGCTGATGT AGTGATTCTG TCTGATTACG GCAAAGGTGC TTTAGGTCAA
GTAGCTCACA TGATTGAGCA AGCTAGAGCG CAAAACCAAA TGATTTTGGT AGACCCTAAA
GGCGAAGACT ACGAGAAGTA TCGTGGCGCC ACGGTCTTAA CGCCGAACTG TAGCGAGCTG
CGCCAAGTGG TTGGCCAGTG GGCTAGCGAA GAAGATTTAA CCAAAAAGGC TGAAGATCTC
AGGAGGTCTC TTGATTTGCA GGCCTTGCTC TTGACGCGTT CTGAAGAGGG TATGAGTTTA
TATACTGATG CAGGTGTGAG TCACGTTAAG GCACAAGCTC GCGAGGTATT TGATGTGTCT
GGCGCAGGCG ATACTGTGAT TGCTACTTTA GCTGTTGCTT TGGCTGCCAA GTGGCCTTTA
GAAAAAGCCA TGGCCCTTGC AAATCGTGCA GGCGGTATTG TGGTTGGTAA GTTAGGTACT
GCAACCGTTA CTTCAGAGGA ATTACAGTGA
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| Protein sequence | MEKANRDQFS KARLLVVGDV MLDRYWFGDT NRISPEAPVP VVQVGKIDEC LGGAANVARN
VAALDAKATI LGIVGNDEPG KRVVELLKAG GVDSQLEIDA DVPTIVKLRV IARQQQLIRL
DFEETPSAKA LAHKLERFEK LVGDADVVIL SDYGKGALGQ VAHMIEQARA QNQMILVDPK
GEDYEKYRGA TVLTPNCSEL RQVVGQWASE EDLTKKAEDL RRSLDLQALL LTRSEEGMSL
YTDAGVSHVK AQAREVFDVS GAGDTVIATL AVALAAKWPL EKAMALANRA GGIVVGKLGT
ATVTSEELQ
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