| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1303 |
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| Symbol | |
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| ID | 6183688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1125136 |
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| End bp | 1126155 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671864 |
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| Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
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| Protein accession | YP_001798037 |
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| Protein GI | 171463924 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.000546988 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACTATCA TCGTAACCGG CGCAGCTGGA TTTATTGGTG CCAATATTGT TCAAGCGCTT
AATGTACGTG GTGAAAAAAA TATCATTGCA GTTGACGATC TTCGTCCTGC TGATAAATAC
CGCAACCTCG CTGATTTAGA CATCATTGAC TACCTTGATA AAGATGAATT TCTAGAAGCA
TTTAGAAGTG GTCGCTTTGG CAAAGTCAAA GCAGTGTTTC ATGAGGGGGC TTGTTCTGAC
ACTATGGAAA CCGATGGCAT TTTCATGATG GCGAATAACT ATCGCTATAC CATGGATCTA
TTGGATATTT GTACCGCCCA AAAAGTGCAG CTGCTTTATG CCTCTTCCGC GGCAACTTAT
GGTGGGTCTG ATGTGTTTGT AGAGAGTCGT GAGCATGAGA AGCCACTCAA TATCTACGGT
TACTCTAAGT TCTTATTTGA CCAGGTGATG CGTAAGCGCT TTGCAGAAAA GACAAATACG
GCACAAGTGG TTGGTTTTCG CTATTTCAAC GTATATGGTC CGCGTGAGTC ACACAAAGGC
CGCATGGCTT CGGTAGCCTT TCATCAATAC TACCAGTACA AGGCTAATGG GCATGTGAAG
CTCTTTGGCG AGTATGGTGG TTACGGTGCG GGCGAGCAGA GTCGCGACTT TGTGTCGGTC
GAAGATGTTG TGAAAGTAAA TCTATTTTTC TTGGATCATC CAGAAATCAG TGGCATCTTT
AATTTAGGGA GCGGCCGTGC GCAACCCTTT AATGATGTCG CTCACGCAGT AGCAAACGCA
ATGCGTAAGC TCGATAAAGC GGCGCCAGCA TCCTTGCAAG AGCTTGTTAA GGAAAAAGCC
ATTGAGTACA TTCCATTTCC GGATGCGCTT AAAGGTAGGT ATCAATGCTT TACGCAGGCT
GATTTAACTA AGCTGAGAGC GGCTGGCTAC GCAGAACCCT TCCTAACTGT TGAGCAGGGT
GTAGGAAGAT ATATCGAATG GCTGGAAGCC AATTCTAGTT TCTTGGCTAA TCCCCTTTAA
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| Protein sequence | MTIIVTGAAG FIGANIVQAL NVRGEKNIIA VDDLRPADKY RNLADLDIID YLDKDEFLEA
FRSGRFGKVK AVFHEGACSD TMETDGIFMM ANNYRYTMDL LDICTAQKVQ LLYASSAATY
GGSDVFVESR EHEKPLNIYG YSKFLFDQVM RKRFAEKTNT AQVVGFRYFN VYGPRESHKG
RMASVAFHQY YQYKANGHVK LFGEYGGYGA GEQSRDFVSV EDVVKVNLFF LDHPEISGIF
NLGSGRAQPF NDVAHAVANA MRKLDKAAPA SLQELVKEKA IEYIPFPDAL KGRYQCFTQA
DLTKLRAAGY AEPFLTVEQG VGRYIEWLEA NSSFLANPL
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