| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1298 |
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| Symbol | |
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| ID | 6183561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1122922 |
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| End bp | 1123350 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671859 |
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| Product | helix-hairpin-helix motif |
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| Protein accession | YP_001798032 |
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| Protein GI | 171463919 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.00131845 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCCAT TATTAAGTAG CGGTAATTTT CTAAAAAGCT TGAGATTGAC GGCTGTTGCG
GCAACCTTAT CCGTACTTGG CGTAGTGCCT GTAATTGCCT CGCCTATTAA CGTTAATACC
GCCACCCAAT CTGAGTTAGA GAGCATCAAG GGAATTGGTC CAGCCAAGGC AAAGACAATT
ATCGCCGAGT GTTTAGATGG CGGACACTTT CAAGATGCTA ATGATTTGCA AAAACGAGTT
CGCGGTATTG GTATGAAATC GGTTGAAAAA ATGGTGGATA ACGGATTAAC AATAGAAGCA
CCCAGCTCCT TTCGGGAGCC TAATGGTCGC ACCAAAAAGG AGGGCGGAGC CTCTGCTCGA
CGTGGTTCTC ATAATCAAGC TGGTGATCGC AATCAGCAGG GGCGTTCGGG AGCGGGTCGC
CGAAATTAA
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| Protein sequence | MNPLLSSGNF LKSLRLTAVA ATLSVLGVVP VIASPINVNT ATQSELESIK GIGPAKAKTI
IAECLDGGHF QDANDLQKRV RGIGMKSVEK MVDNGLTIEA PSSFREPNGR TKKEGGASAR
RGSHNQAGDR NQQGRSGAGR RN
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