| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1294 |
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| Symbol | |
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| ID | 6183259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1120788 |
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| End bp | 1122041 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671858 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001798031 |
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| Protein GI | 171463918 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.00378747 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTTTC GCGTCTCCTA CTTGCTTATT GCTCTTGCGC TAGCAGCGTG CTCAAGCGCG
CCTATAACAC CAACGCAATC ACAACAACCT ATCGTAAACC AGACTGATGA TGCGGTCACA
GAGGCGCGTT TTAGCCAAAA CCTCAATGAA CTTCTCGGGC AGGTATCCCA AACCCAGGAA
ATCCCACTTT CAACACTAGA AATGGGCTTT CTAGATGCTA AAACGATTCC CTCCATCCGC
AAATTGGTAT TACCCCCATC GGGCACTTTT AAGAAAAATT GGTTGGCTTA CCGCAAACGC
TTTATCGAGC CAGTTCGTCT GAAGGCTGGC AGAGCATTTT GGGACCAAAA CCAAGCATTT
TTGAGTCAAG TTGAGCAAGA ATCAGGGGTT CCTGCCGAGA TTATTGTTGC CATTATTGGC
ATTGAAACCA TTTATGGTCG CCAAACCGGC AGCTTTCGAG TGAAAGACGT ACTTTCTACC
CTGGCATTTA GCTATCCAGA AACCCCCAAC AAGCCGGCTC GGGAGCAACT CTTTAAGGAT
CAGCTAAAAG AACTCATTCT AATGTGTTGG ACGGAGGCTG GCGGTAAATT ACCTTCTAAA
AATAGCAGTC ATAGCGTCAA TAGCGCCCGT TTTAGCGCTT GCTTAAACCA GAACAGCTCT
TACGCTGGCG CAATCGGCCT ACCCCAGTTT ATGCCGAGCA GTATTCGTAA TTTTACGGTG
GATGGTGACG GCGATGGCCA AATCGACCTG AAACAAAGCC CCAAGGACAC TATAGCTAGT
GTTGCTAACT TCATGAAAAA ACATGGCTGG CAACCTGGTA TGCCCATCTC TTTTCCCGTT
CAGGTCAATG GTATTGCCGA GGCAAAAGAA TTAGCCGATG GCGAGCCACA ACTGAAATTT
ACCGTACAAG AGCTTATTGA TAAAGGAATT TTGACCAAGC AACAAGGTGA TCTGCAAAGT
GGTGGTGTAG CGCCTCAAAG TAAAGCTTTC ATCGTAGATC TACCTTATCC CGATAAAGAT
GGCGCGGATC AAGTGCAATA TTTTGTGGGT TTAAATAATT TTCTGACGAT TGTTCAGTAC
AACCGTAGCT ACTTCTATGC ACAGAGCGTT GCCGAGTTTG CTGAAGCCTT AGGATATAAA
AATCAGAGCA TAGTACCCAT AGAGAGTTCA AGTAAAAGCA CGGGCGCTAA AGCAGCCCCT
GAAAAATCTA AATCTAAGAA ATTGAGCGCA AAGAAAAAAT CGAAGTCTGC TTAG
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| Protein sequence | MNFRVSYLLI ALALAACSSA PITPTQSQQP IVNQTDDAVT EARFSQNLNE LLGQVSQTQE
IPLSTLEMGF LDAKTIPSIR KLVLPPSGTF KKNWLAYRKR FIEPVRLKAG RAFWDQNQAF
LSQVEQESGV PAEIIVAIIG IETIYGRQTG SFRVKDVLST LAFSYPETPN KPAREQLFKD
QLKELILMCW TEAGGKLPSK NSSHSVNSAR FSACLNQNSS YAGAIGLPQF MPSSIRNFTV
DGDGDGQIDL KQSPKDTIAS VANFMKKHGW QPGMPISFPV QVNGIAEAKE LADGEPQLKF
TVQELIDKGI LTKQQGDLQS GGVAPQSKAF IVDLPYPDKD GADQVQYFVG LNNFLTIVQY
NRSYFYAQSV AEFAEALGYK NQSIVPIESS SKSTGAKAAP EKSKSKKLSA KKKSKSA
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