| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1285 |
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| Symbol | rpsP |
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| ID | 6183418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1112940 |
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| End bp | 1113185 |
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| Gene Length | 246 bp |
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| Protein Length | 81 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671851 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_001798024 |
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| Protein GI | 171463911 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.362311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.280528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCGTCA TTCGACTGGC ACGTGGCGGT TCTAAGAAGC GCCCTTTTTA CAGCATCGTT
GCTACTGATA AGCGCAACCG TCGTGACTCG AACTTTATCG AGCGTATTGG TTACTTCAAC
CCACAAGCAG CCGCTACTGA GCAAGCAATG CGCATTGCTC AAGATCGCTT GACTTACTGG
ACTGGTGTTG GCGCGCAAAT TTCTCCAACA GTAGTGCGTT TGATTAAAAA CAATCCAGCT
GTTTAA
|
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| Protein sequence | MVVIRLARGG SKKRPFYSIV ATDKRNRRDS NFIERIGYFN PQAAATEQAM RIAQDRLTYW
TGVGAQISPT VVRLIKNNPA V
|
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| |