| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1278 |
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| Symbol | |
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| ID | 6183840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1108264 |
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| End bp | 1109214 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671846 |
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| Product | ribosome small subunit-dependent GTPase A |
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| Protein accession | YP_001798019 |
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| Protein GI | 171463906 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00470592 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGT TTCATGCGCT ACTCATTGCC TCCTACGGAA GGCACTATTT AGCGCAGCGT
TTATCTGCGG ATGCTTTTGG CAAGGAAGCG CCTGATGGCC CCCTGATTCA AGTTAGCACT
CCAGCCAAGA AACATATTGG CGCTGTAGGT GACCGCATGC TGCTTGAAAT GACTTCTGCA
GATCAAGCGC GGATTATCCA AATTGAGCCT CGAGAAAATC TACTCCATCG CTCAGATGCT
TTTAAGAGTA AGTTGATCGC TTCAAATGTG GATCAAATTC TTGTAGTGCT CGCAACACAA
CCTGCTTTCT CACCAGACCT TTTGGGCCGA GCAGTAGTGG CAGCAGAAGC CAATCAAATT
GGCCTGCATA TCCTGCTTAA TAAATGCGAT CTAAAAGATA ATCTGGAGCA TGCTCGTGAA
ATCATTTCGC CCTACGCCCG CATGGGCTAC CAAGTTAGTG AAGTCTCGGC TAAATTTGAT
CCCACTTCAA TTAATTCTTT ACGCACTTCG CTTCAAGGTA AGGTGTCCGT TTTTGTGGGC
CAATCAGGTA TGGGTAAGTC CAGCCTATTA AATGCCTGGA TTCCAAATGC AGCCGCGCTG
ACTCAAGAAT ATTCTGTGCG CCTAGATACT GGTAAGCACA CCACTACTGC CTGTCGATAC
TTCGAGCTAC CAGAAGCTTG GGGCAGAGAC GAAACTGGCA AGCTCGGTGC ACTCATCGAC
TCTCCAGGCT TTCAAGAGTT TGGTTTAGCG CATATGTCTG TGAGCGAGCT TCAACATGCT
TTTAGAGAAT TTAAAGACTT GCTTGGTAAA TGCCGCTTTC ATAATTGCGC GCATTTATCT
GAACCCGATT GCGCAGTGCG CGAAGCAGTA GACAGAAACG AAATAGCGCC AGAAAGACTG
GCGCTATTTA GACAACTGCA CAACAGCGGA TGTGCAAATT CAGGGAATTA G
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| Protein sequence | MEQFHALLIA SYGRHYLAQR LSADAFGKEA PDGPLIQVST PAKKHIGAVG DRMLLEMTSA
DQARIIQIEP RENLLHRSDA FKSKLIASNV DQILVVLATQ PAFSPDLLGR AVVAAEANQI
GLHILLNKCD LKDNLEHARE IISPYARMGY QVSEVSAKFD PTSINSLRTS LQGKVSVFVG
QSGMGKSSLL NAWIPNAAAL TQEYSVRLDT GKHTTTACRY FELPEAWGRD ETGKLGALID
SPGFQEFGLA HMSVSELQHA FREFKDLLGK CRFHNCAHLS EPDCAVREAV DRNEIAPERL
ALFRQLHNSG CANSGN
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