Gene Pnec_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1272 
Symbol 
ID6183172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1102473 
End bp1103135 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content49% 
IMG OID641671841 
ProductCarboxylesterase 
Protein accessionYP_001798014 
Protein GI171463901 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCTT GCATTGAATT AGAAACCAGC CCGAACCCAA CAGCAGCCGT TATCTGGCTA 
CATGGCCTTG GTGCCGATGG GAATGATTTC GTACCGATCA TTCCCGAACT AAAGCTGGCC
GGCTGCCCAG GAATTCGCTT TGCATTTCCG AGTGCGCCCA GTATGCCGGT CACCGTTAAT
GGCGGATACG TCATGCCAGC CTGGTATGAC ATCATCGGCA GAAACCTGAT GGATCAAGAG
GATGCTGGCG GCATTCAGCG ATCAGCTGTA TCAATAGCAG AACTCATTGA GAAAGAAGCC
AGTCGAGGCA TTGCATACGA CAAAATTGTT TTGGCAGGAT TTTCACAGGG CTGTGCAATG
GCTTTGCATA TCGGCTTACG GTTTCCGCAT AAGCTAGCAG GCATCATCGC TCTCTCAGGC
TACTTACCTC TGGCGATGAG CGCTAATTTA GAGAAGCATT CCGCTAATTC AAACACCCCC
ATCTTTATGG CGCATGGCAC TTATGATCCA GTTGTTACCC TTGATCGGGC TCAGGCTTCA
TACGCTGCAC TAGAAACAAT GGGTTACCAA GTAGACTGGA ATGAATACCC TATGGAACAT
TCCGTCAATC ATGAAGAGCT TATGGATATT TCTCGATTTT TACAGCAAGT GTTGGCAGCT
TGA
 
Protein sequence
MLPCIELETS PNPTAAVIWL HGLGADGNDF VPIIPELKLA GCPGIRFAFP SAPSMPVTVN 
GGYVMPAWYD IIGRNLMDQE DAGGIQRSAV SIAELIEKEA SRGIAYDKIV LAGFSQGCAM
ALHIGLRFPH KLAGIIALSG YLPLAMSANL EKHSANSNTP IFMAHGTYDP VVTLDRAQAS
YAALETMGYQ VDWNEYPMEH SVNHEELMDI SRFLQQVLAA