Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1272 |
Symbol | |
ID | 6183172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 1102473 |
End bp | 1103135 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641671841 |
Product | Carboxylesterase |
Protein accession | YP_001798014 |
Protein GI | 171463901 |
COG category | [R] General function prediction only |
COG ID | [COG0400] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCTT GCATTGAATT AGAAACCAGC CCGAACCCAA CAGCAGCCGT TATCTGGCTA CATGGCCTTG GTGCCGATGG GAATGATTTC GTACCGATCA TTCCCGAACT AAAGCTGGCC GGCTGCCCAG GAATTCGCTT TGCATTTCCG AGTGCGCCCA GTATGCCGGT CACCGTTAAT GGCGGATACG TCATGCCAGC CTGGTATGAC ATCATCGGCA GAAACCTGAT GGATCAAGAG GATGCTGGCG GCATTCAGCG ATCAGCTGTA TCAATAGCAG AACTCATTGA GAAAGAAGCC AGTCGAGGCA TTGCATACGA CAAAATTGTT TTGGCAGGAT TTTCACAGGG CTGTGCAATG GCTTTGCATA TCGGCTTACG GTTTCCGCAT AAGCTAGCAG GCATCATCGC TCTCTCAGGC TACTTACCTC TGGCGATGAG CGCTAATTTA GAGAAGCATT CCGCTAATTC AAACACCCCC ATCTTTATGG CGCATGGCAC TTATGATCCA GTTGTTACCC TTGATCGGGC TCAGGCTTCA TACGCTGCAC TAGAAACAAT GGGTTACCAA GTAGACTGGA ATGAATACCC TATGGAACAT TCCGTCAATC ATGAAGAGCT TATGGATATT TCTCGATTTT TACAGCAAGT GTTGGCAGCT TGA
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Protein sequence | MLPCIELETS PNPTAAVIWL HGLGADGNDF VPIIPELKLA GCPGIRFAFP SAPSMPVTVN GGYVMPAWYD IIGRNLMDQE DAGGIQRSAV SIAELIEKEA SRGIAYDKIV LAGFSQGCAM ALHIGLRFPH KLAGIIALSG YLPLAMSANL EKHSANSNTP IFMAHGTYDP VVTLDRAQAS YAALETMGYQ VDWNEYPMEH SVNHEELMDI SRFLQQVLAA
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