Gene Pnec_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1267 
Symbol 
ID6183348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1099065 
End bp1099406 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content44% 
IMG OID641671837 
Producthypothetical protein 
Protein accessionYP_001798010 
Protein GI171463897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.224169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGAA AAATTCGCCA GAAATTGATT GCCTTGGATC AGCCCATCGC GCAAAAGACC 
ATTGAAGTCG TTTGCCCAAT CTGTGAGCGC CCCATCCCAC CTTCGCAAAG AGACGCCCAT 
CATCTCATCC CCAAATCCAA AGGTGGCAAA ACAACCGAGT ATCTTCACCG CATATGCCAT 
AAGCAAATAC ATGCCTTATT TACTGAAACA GAGTTAGCCC AGCAATACCA CCATGCCAAA 
GTATTAAGGG ATCATCCAGA GATAAAGAAA TTTATTCGGT GGGTTGAAAC CAAACCAAAC 
GCGTTTTATG AAAGAACGCG TAAAAGTAGC CGCCTAAAGT GA
 
Protein sequence
MIGKIRQKLI ALDQPIAQKT IEVVCPICER PIPPSQRDAH HLIPKSKGGK TTEYLHRICH 
KQIHALFTET ELAQQYHHAK VLRDHPEIKK FIRWVETKPN AFYERTRKSS RLK