| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1262 |
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| Symbol | |
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| ID | 6183472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1094773 |
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| End bp | 1096131 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671832 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001798006 |
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| Protein GI | 171463893 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.826709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.137617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTA AAAAAATCAA GTCAAAGATC AATCACTCAA AAAGGCAAAC CCTCAAGACC
TCAGCCAAGT TCTTGAGCTT TGCCCTATTG CTGACAGAGC TTGATATTGC CTGGGGCGCC
AAGATTCTGG GTGTGCGCGT CTGGCCATCT GAGGACTACA CCCGCGTTAC TTTGGAATCT
GATACGCCGC TACCGATTAC GCAACAGATT CTGATTAATC CCGATCGCTT AGTGGTTGAT
GTGCAGGGAT TAGAGCTCAA TCCAACATTG AAAGATTTGG TAGCTAAAGT AAAACCAAAC
GATCCTTACA TCTCACAAGT TAGAGTGGGA CAATTTCAAC CAGGCATTGT GCGTTTGGTG
TTTGACTTAA AAGAGCCCAT CAAGCCACAA CTATTTACGC TTGATCCGGT GGCTGAATAT
AACTATCGCA TGGTGTTTGA TTTGTACCCC ACTACACCAC CAGATCCTTT AATGGCTTTA
GTGAGAAGTA GCGCCAAGAA AGAAAGTGCA CTTGAGAAAT CCAATGAAGA AGTGGATTTG
ATTGCGCAGT TTGCAACCAA GAAAGAAAAA GAGTTTGCCA AGACTCCAGC GGCGCCAGTT
GCCCAAGCTA TTCCTGAGCC AAAGGAACTG CCAGCACCCG CTAAATATAA GCGCCTAATC
ACGATTGCAA TTGATCCCGG CCATGGTGGC GAAGACCCGG GCGCTATTGG TGCAGCAGGC
TCTAGAGAAA AGAATGTCGT GCTCGCCATC GCCAAGCGAC TCAAAGACAA GATTGAAGGC
GAAGCTTATA TGCGCCCTTT CTTAACCAGA GACGGCGATT ACTTTGTACC CTTGCATGTC
AGAGTACAAA AAGCCAGACG TGTTGAAGCG GATTTATTTG TATCGATTCA TGCAGATGCC
TTTATTGAAA GAAATGCCAA AGGTGCTTCC GTATTTGCAC TCTCGCAAAT GGGGGCCAGT
AGCACTACTG CGCGCTGGAT GGCCAATAAA GAAAATGCTT CTGACTTGAT TGGTGGCATC
AATATCAAGA CACAAGACAG GCAGGTTGCC AACCTACTTT TAGACATGTC GACCACGGCG
CAGATCAAAG ACTCCCTGCA AGTGGGCAAC TCGATCTTGA GACAAATCGG GGGATTTGCG
CCTCTACACA AGCCCAAGGT TGAGCAAGCC AGTTTTGCTG TTTTAAAGGC TCCAGACATC
CCCTCCATCC TCGTAGAAAC CGCTTTTATC AGCAATCCAC AGGAAGAGGC CCGCCTAAAT
GATGACGGCT ACCAGGATCG CATTGCAGAG GCGATCTTGA GAGGAATTAA GGAGTATTTT
TCCAAAAATC CACCGGTCGC CAGACGGGTA AATTCATAA
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| Protein sequence | MDTKKIKSKI NHSKRQTLKT SAKFLSFALL LTELDIAWGA KILGVRVWPS EDYTRVTLES
DTPLPITQQI LINPDRLVVD VQGLELNPTL KDLVAKVKPN DPYISQVRVG QFQPGIVRLV
FDLKEPIKPQ LFTLDPVAEY NYRMVFDLYP TTPPDPLMAL VRSSAKKESA LEKSNEEVDL
IAQFATKKEK EFAKTPAAPV AQAIPEPKEL PAPAKYKRLI TIAIDPGHGG EDPGAIGAAG
SREKNVVLAI AKRLKDKIEG EAYMRPFLTR DGDYFVPLHV RVQKARRVEA DLFVSIHADA
FIERNAKGAS VFALSQMGAS STTARWMANK ENASDLIGGI NIKTQDRQVA NLLLDMSTTA
QIKDSLQVGN SILRQIGGFA PLHKPKVEQA SFAVLKAPDI PSILVETAFI SNPQEEARLN
DDGYQDRIAE AILRGIKEYF SKNPPVARRV NS
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