Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1242 |
Symbol | |
ID | 6183737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 1074234 |
End bp | 1074641 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641671817 |
Product | rRNA large subunit methyltransferase |
Protein accession | YP_001797991 |
Protein GI | 171463878 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTA CCATTGTTTC AGTTGGTCAT AAGATGCCTG ATTGGGTTGC TACGGCAACT ATTGAAATCA AAGAGATCAA ACCAGATCTC ACACTTGCTA AAGAAGCAGT CAAAATTGCT GCAGCTATTC CGAAAGGCTC TAGAGTCATC GCCTTGGATG AGCGAGGCAA AGACCAGACC ACTCAAAATT TAGCCACTCA ACTAGCCAGC TGGCGCCAAG AAGGTTTTGA TATCACCTTC TTAATTGGCG GCGCAGATGG CTTGGATCCC AGCCTGAAAA CGACTGCGCA AGCTATATGG CGTCTCTCTA GCTTGACTCT GCCGCATGCT ATGGCCAGAG TACTATTGGT TGAGCAACTC TACCGAGCCT GGACTATCTT GCAGGGTCAC CCTTACCATC GCGAGTAA
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Protein sequence | MRLTIVSVGH KMPDWVATAT IEIKEIKPDL TLAKEAVKIA AAIPKGSRVI ALDERGKDQT TQNLATQLAS WRQEGFDITF LIGGADGLDP SLKTTAQAIW RLSSLTLPHA MARVLLVEQL YRAWTILQGH PYHRE
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