| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1235 |
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| Symbol | |
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| ID | 6183655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1067581 |
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| End bp | 1068741 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671810 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001797985 |
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| Protein GI | 171463872 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.104582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGC TCTTTCCCTT CATCTATGAG CGCTATTTAG CTAAGCAGAT CTATGCTGCT
TTTGGCTTCA TCCTCTTTGC TTTAGTGGCC TTATTTTTGT TCTTTGATAT ATTGAGCGAA
CTCGGCTTAG TGCAAGGGAC TTACACGCTC CCACTAGCAC TGCTGCACGC CCTCCTCAAG
GCGCCAAGCC GCATATCTGA AATCATTCCC ATTGCAGGCT TGATTGGCAG TATCTATGTC
TTTGCCATGT TGGCAAGTCA GTCTGAATTC ACCATCTTGC GTATCGCAGG CCTAGATGTC
AAACGCGGAC TTATTGCCTT AACCAAAATC TCCATCCCCT TAATCGCACT TACTCTCATC
ATGAGCGAAT GGATTGGACC CTATACCGAA GCAAAGTCAG ACCAGATTCG TATGAAGGCT
ATGGGGTCCG CTTACTCATC TCAATTTAGA ACCGGCGTCT GGGTGAAGGA TCGCTTACGT
GATGAGGATG GTAGCGGTCC AGTACGCCCT GGGGTCCGGT ACGTCAACGT GGGCAAGGTT
GACAAGGATA ATGAGATTCG CAATATCCGC ATGTATGAGT TTGACGACAC CTATCACCTA
CTCTCCATTC GTAGCGCCGT GTCAGGGCAG TTTGATGAGA CAGGTGTCTG GGTTCTAAAC
GATGTAACAG AAACTCGCTT TAAAGAAACT AAACAGTCTG ACCCCCTTAA TCCTGTTTTC
TCTGCGCAGA CTTTTACACG TCCAATCGTT ACACTGGAAT CTGAGGTAAC ACCTCAAATC
TTAAGCGTGC TTTTAATTAG TCCTGAAAAA ATGTCGATCA TGAGTTTGGG TCGCTTCATA
TCCCATCTCC GTGAGAACAA ACAAGATGCC CATCGTCATT CGATTGCCTT CTGGAAAAAA
GTGGTTTACC CATTTACTAT TTTTGTGATG CTGACATTAG CGCTTCCTTT TGCTTACCTG
AAAGTGCGTG CAGGCAGCGT TGGCATCAAG GTATTTGGCG GAATCATGTT GGGCATGAGC
TTCCAGCTAT TCAATTCTTT ATTCTCAAAC GTAGGTCTTT TGGGATCCTG GCCGGCACTG
ATCACAGCCC TTACGCCGCC TTTGCTGTAC TTCCTATTAG CGCTAGCTGG ACTGCGCTGG
GTTTCAAAGC TTAATACCTG A
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| Protein sequence | MKLLFPFIYE RYLAKQIYAA FGFILFALVA LFLFFDILSE LGLVQGTYTL PLALLHALLK
APSRISEIIP IAGLIGSIYV FAMLASQSEF TILRIAGLDV KRGLIALTKI SIPLIALTLI
MSEWIGPYTE AKSDQIRMKA MGSAYSSQFR TGVWVKDRLR DEDGSGPVRP GVRYVNVGKV
DKDNEIRNIR MYEFDDTYHL LSIRSAVSGQ FDETGVWVLN DVTETRFKET KQSDPLNPVF
SAQTFTRPIV TLESEVTPQI LSVLLISPEK MSIMSLGRFI SHLRENKQDA HRHSIAFWKK
VVYPFTIFVM LTLALPFAYL KVRAGSVGIK VFGGIMLGMS FQLFNSLFSN VGLLGSWPAL
ITALTPPLLY FLLALAGLRW VSKLNT
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