| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1234 |
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| Symbol | |
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| ID | 6183325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1066469 |
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| End bp | 1067584 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671809 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001797984 |
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| Protein GI | 171463871 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.132199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTTA AACAGGCCCT TCGCCGCGAA CTCAGTTTTA CGACTGGCGG GGTCTTTTTG
GTCTTAGTTA CCATCATGGT GACTACCTTG GTGATCCGAA TTTTGGGATA CGCGGCTAAC
GGCGCAGTCA ATCCAGAGGA TACACTCGTT CTAATCGCCT TAGCAACTTT GGGATATCTT
GCAGTCCTTT TAACAGTTTC TTTATTTGTT GCAACCCTCA TTGTTTTGGT GCGCTGGTAC
AAAGATTCAG AAATGATCGT TTGGCTTGCA AGCGGTTTAA GCGTCACCAA CCTCATTCGC
CCCATCTTGC AATTTGCTAC ACCACTCATC ATTGTCATTG CCTTGCTAGC GCTTTTTGTT
TGGCCGTGGG CAAATCGAGA ATCCACATTA ATTAGTCAGC GCTCTCAACA ACGTGACGAT
GTATCTGTGG TTAGCGCCGG ACAATTTAAG GAGTCCGCAA AAGCAGAGCG CGTCTTCTTT
ATTGAAGAGC TCGATGTTGA TAAGAGTAAA GTAAAAAATA TTTTTGTAGC TAACTCAAAG
AATGGTCGCC TGAGCATTGC AGTGTCATCA ACTGGCTACA TCCAAAATTC GGAGGGCGGG
GAAAAATCTA TCGTTCTCCA TAACGGCCGG CGCTATGAGG GGCAACCCAC CCAGCCTGAT
TTTAGGATCC TGGAATTTAA TGAATACAGC ACGAAAATTC GTAGCAAAGA TGCGTTAGCG
CCTGCACCAC GAGATCGCGA GAAAACGATT ACCGAACTTC TTAATGATCC CAATCCAACC
TCCGTCAATC CCAATCGTGC TGAATTACTT TGGCGCATAG GTCTGCCATT AATGGCCTTA
GGTTTAGTGT TGATTGCAAT ACCGCTTGCA TATGTAAACC CACGTCTGGG TAATTACACG
GCGATGTTTT ATGCAGTCTT GATTTATCTG ATTTACAGCA ACCTTTTGAA CTTGACCCAA
AATTTTGTGT CGCAAGGAAG GATCAGTGTT TTTGTCGCAA TCTGGCCAAT ACATCTACTT
GCCCTGTTGA TTACAACCGT CTTAATTCGC AATCGTATTA ACCCCTCACT GAAGTGGTGT
CTCCGTCAAT TGCTCGCCTC AATGGCTAGA AAATGA
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| Protein sequence | MIFKQALRRE LSFTTGGVFL VLVTIMVTTL VIRILGYAAN GAVNPEDTLV LIALATLGYL
AVLLTVSLFV ATLIVLVRWY KDSEMIVWLA SGLSVTNLIR PILQFATPLI IVIALLALFV
WPWANRESTL ISQRSQQRDD VSVVSAGQFK ESAKAERVFF IEELDVDKSK VKNIFVANSK
NGRLSIAVSS TGYIQNSEGG EKSIVLHNGR RYEGQPTQPD FRILEFNEYS TKIRSKDALA
PAPRDREKTI TELLNDPNPT SVNPNRAELL WRIGLPLMAL GLVLIAIPLA YVNPRLGNYT
AMFYAVLIYL IYSNLLNLTQ NFVSQGRISV FVAIWPIHLL ALLITTVLIR NRINPSLKWC
LRQLLASMAR K
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