| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1233 |
|---|
| Symbol | |
|---|
| ID | 6183627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 1064700 |
|---|
| End bp | 1066310 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641671808 |
|---|
| Product | Leucyl aminopeptidase |
|---|
| Protein accession | YP_001797983 |
|---|
| Protein GI | 171463870 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTC AATTTAGTAC CAAGATTTTC CCTCAAGCAG ACCTGCAGAG TCCAAAACTC
CAGAAATCTA GCCTCAAATC CTTGTTTAGC CACAGTACTG ACTGCTTGGT CTTGGCCTAT
TCCAAAGCGG ATTTTGATGG CTTCTCTGGG GCAAAAGGCG CCAAGGCAAA AGCAGGATTT
TTGCCAGAGT TAGATCTCTT GCTTGGGGGT TCGGTCAATC ACGCCAATAT TGTTGGAGAT
TTAGATCCTA AGCAGGCCTC TGTTTGTATG TTGCGCGCAG AAAAATCCTG GGTCAGTAGT
GGTGTTAAAT CAAAGCGTGT GCTTTTGGTG GCTTTGGGCG ATCTTCATCT GGCTAGCGAA
CGCAGTTTAA CCACCTATTC CAAAGTAGCT CGCGCTGCTT TGAAGGTGCT GAGTGGCGGG
TCAATTGAAA GTGCGCTTTG GTTTACGCCG AGCTTTGCAC TTGCTCATAA AGCAGATTTC
ATTGCGGAAG AGGTGCGCCT AACGGTTCAA TATGCTGGCG ATCAAGCTTA TCGTTTTGGT
GTTCGTCAGT CAACTATGAA ATTTAAAGCT AAAGATACAG CAGATACATT TAAGCAGTTG
GTATTTGCTG GCAATAATGA CTGTGCAAAA GAATTAAAAG CCGCCGTAGA GCAGGGCGTG
GCCATGGTTG ACGGTATGAA TCTAGCAAAA GACTTGGGCA ATCTTCCGCC TAATATTTGT
ACGCCAACTT ACTTAGGTAA GGCTGCGCAA GGTTTGAGCA AGAAGACTGG ATTGAAGGTT
GAAGTACTTA GACGTAAGCA GATTGAGGCA TTGGGAATGG GTTCATTCTT GTCCGTTGCC
AAAGGTTCTG ATACACCGCC GCAATTTATT GTGATGCGCC ACCAAGGTGG TAAAGCGGGT
GAGGCGCCAA TTGTTTTGGT TGGCAAAGGA ATTACTTTCG ACACCGGAGG CATCTCTCTC
AAGCCAGGCG AAGCCATGGA TGAAATGAAA TACGACATGT GTGGGGCTGC ATCTGTCATC
GGCACTATGT ACTCCGTTTC TTTAATGAAA TTAAAGAAGA ATGTGATTGG AGTCGTTCCT
ACTTGTGAAA ATATGCCATC AGGTCAAGCT ACACGACCAG GCGATATTGT GAAGAGTATG
TCAGGACAGA CAATTGAAAT TCTCAACACT GATGCAGAAG GTCGCTTAAT TCTGTGTGAT
GCTTTGACTT ATGTCGAGCG CTTCAAACCG GCAGCGGTGA TTGATGTCGC AACTTTAACG
GGCGCTTGTG TGATTGCATT GGGTCATGTC CATAGCGGTT TGTTTTCTGA AGATGAGGGC
TTGGTTAACG AGCTCACAAA AGCAGGTCAT GCTTCTTTAG ATACTGTGTG GCGCCTACCT
TTGGATGCTG CCTATCATGA GCAGCTCAAA TCCAATTTTG CCGATGTTGC AAATATTGGT
GGGCGCCCAG CGGGCAGCGT AACTGCAGCC TGCTTCTTGT CACGTTTTAC TGAGAAATAC
AAATGGGCCC ATTTAGATAT TGCTGGAACC GCATGGAAGA GTGGTGCTGC TAAAGGCTCA
ACTGGTCGCC CAGTTCCCTT GTTGGTAAAT TTCTTGCTTG AGCGCAAATA A
|
|---|
| Protein sequence | MTIQFSTKIF PQADLQSPKL QKSSLKSLFS HSTDCLVLAY SKADFDGFSG AKGAKAKAGF
LPELDLLLGG SVNHANIVGD LDPKQASVCM LRAEKSWVSS GVKSKRVLLV ALGDLHLASE
RSLTTYSKVA RAALKVLSGG SIESALWFTP SFALAHKADF IAEEVRLTVQ YAGDQAYRFG
VRQSTMKFKA KDTADTFKQL VFAGNNDCAK ELKAAVEQGV AMVDGMNLAK DLGNLPPNIC
TPTYLGKAAQ GLSKKTGLKV EVLRRKQIEA LGMGSFLSVA KGSDTPPQFI VMRHQGGKAG
EAPIVLVGKG ITFDTGGISL KPGEAMDEMK YDMCGAASVI GTMYSVSLMK LKKNVIGVVP
TCENMPSGQA TRPGDIVKSM SGQTIEILNT DAEGRLILCD ALTYVERFKP AAVIDVATLT
GACVIALGHV HSGLFSEDEG LVNELTKAGH ASLDTVWRLP LDAAYHEQLK SNFADVANIG
GRPAGSVTAA CFLSRFTEKY KWAHLDIAGT AWKSGAAKGS TGRPVPLLVN FLLERK
|
|---|
| |