| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1211 |
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| Symbol | |
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| ID | 6183751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1048733 |
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| End bp | 1049608 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671792 |
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| Product | chromosome segregation and condensation protein ScpA |
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| Protein accession | YP_001797968 |
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| Protein GI | 171463855 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1354] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000668122 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATG TAGGCAATGA GCCTAACGCT CAGCCCATAT CAGATTTGCT CGACAGCACT
CCATCGGTAA CCGATGGCAT GTCGGCTGCT TTCGCCAAGC TGTACGGTGA ACCACTTTTT
AAGCTACCAA CAGATCTCTA TATTCCTCCA GATGCTCTAG AAGTTTTTCT AGAAGCATTT
GAAGGCCCAT TAGATCTATT GCTATATCTC ATTCGCAAAC AAAACTTTAA CGTTCTTGAT
ATTCCAATGG CACAGGTTAC TCAACAGTAC CTAAGCTACA TCGATCAAAT TCGCCATCAC
AACCTTGAAC TGGTTGCTGA ATACTTGCTC ATGGCTGCCA TGTTGATTGA AATTAAATCG
CGCATGCTTC TGCCAATGAA GAAGGCTGAC AGCGAAGAAG AAGTAGAAGA TCCACGTGCA
GAATTAGTGC GTCGCCTCTT GGAGTACGAG CGCATGAAGC TTGCCGCTCA AGAGCTCGAT
CAAATTCCAC AACAGGGTCG TGACTTCCAA GTGGCGCACG GCTATGTAGA TACCACCACT
GCGATTGCTT GGCCGGATGT CAATGTAGAA GATTTGCAAA TGGCTTGGCG TGATGTTCTG
CACCGCGCCA AACTCACTCA GCATCACACC ATTACCCGTG AAGAATTATC TGTGCGCGAC
TTTATGACAC GCATCTTACG TCGCCTACAA AGCACTAAAT TTGTAGAGTT CGGCGAATTA
TTTGAAGATG CAATTAAGTC TGGCAAAGGT ATTCCAGTGG TGATCGTAAA CTTTATCGCG
ATGCTTGAAC TCTCCCGTGA AGCTTTAGTG GAAATCACGC AAGCCGAGCC ATATGCGCCA
ATTTATGTGC GCCTTGCTTA TACCCCTGTT GCATGA
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| Protein sequence | MTNVGNEPNA QPISDLLDST PSVTDGMSAA FAKLYGEPLF KLPTDLYIPP DALEVFLEAF
EGPLDLLLYL IRKQNFNVLD IPMAQVTQQY LSYIDQIRHH NLELVAEYLL MAAMLIEIKS
RMLLPMKKAD SEEEVEDPRA ELVRRLLEYE RMKLAAQELD QIPQQGRDFQ VAHGYVDTTT
AIAWPDVNVE DLQMAWRDVL HRAKLTQHHT ITREELSVRD FMTRILRRLQ STKFVEFGEL
FEDAIKSGKG IPVVIVNFIA MLELSREALV EITQAEPYAP IYVRLAYTPV A
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