| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1200 |
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| Symbol | |
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| ID | 6184003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1037451 |
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| End bp | 1038416 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671783 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001797959 |
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| Protein GI | 171463846 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.580193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.533215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAA CCCTGAATTC TTCTCCCCAA TCCGCCCCCA AACGCCTAGT AATTGCCTCC
CGTGAAAGTC GTTTGGCCAT GTGGCAGGCT GAGCACGTCC AAGATTGCCT TAAAAAGCTC
TATCCGGACT GTGATGTCCA AATCTTGGGG ATGACTACTC GCGGTGACCA AATATTGGAT
AGAGCCCTCT CAAAAGTGGG TGGTAAAGGC CTTTTTGTAA AAGAGCTTGA AACAGCCCTT
GAGGATGGTC GGGCTGATTT AGCAGTGCAT TCCTTAAAAG ATGTCCCCAT GGTGATGCCA
GAGGGGTTTG ATCTTGCCTG CGTCATGGCC AGAGAGGATG CAAGGGATGC GTTTGTTTCA
AATGATTACG CTAGCCTTGA GGATCTTCCG ATCGGAGCAA TTGTGGGTAC CTCTAGCTTG
CGACGGGAAT CGGTTTTGCG TGCCAAGTTT CCTCATCTCG TGATTCAGCC TTTACGCGGT
AATTTGGATA CCCGTATGGG TAAATTGGAT AAAGGTGAGT ACCAGGCGAT TATTTTGGCT
GCTGCTGGTT TAAAGCGCTT AGGTTTAGAG TCACGCATAC GAGCATTCTT GCCATACGAT
CCTTATACGC CAGCTGCAGG GCAGGGCGCC CTAGGAATCG AAACCTTGAG TAAACATCCC
AATATTAAGC AATGGCTCGC GCCATTAAAT GATTTGCCTA CATTGTTCGC TGTTTCAGCT
GAACGCATGG TGTCACGTCA GCTAGGAGGG TCTTGTGAAG TGCCGCTCGC TGCACACGCT
GTACGGGATC AAAATCAAAT GCAGATTCGC TCTTTTGTTG CGAGCACTGA TGGCAAAGCA
ATTTGCTTGG CTCATGGCAG CGCATTAGTT GAGTCGGTCG AAGATGCAGA AGCATTGGGT
CTTGCGGTCG CGCAAGATTT GCTCTCACAG GGCGCGGCAG ATTTAATTCC TGCACTACCA
AAATAA
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| Protein sequence | MSQTLNSSPQ SAPKRLVIAS RESRLAMWQA EHVQDCLKKL YPDCDVQILG MTTRGDQILD
RALSKVGGKG LFVKELETAL EDGRADLAVH SLKDVPMVMP EGFDLACVMA REDARDAFVS
NDYASLEDLP IGAIVGTSSL RRESVLRAKF PHLVIQPLRG NLDTRMGKLD KGEYQAIILA
AAGLKRLGLE SRIRAFLPYD PYTPAAGQGA LGIETLSKHP NIKQWLAPLN DLPTLFAVSA
ERMVSRQLGG SCEVPLAAHA VRDQNQMQIR SFVASTDGKA ICLAHGSALV ESVEDAEALG
LAVAQDLLSQ GAADLIPALP K
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