| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1199 |
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| Symbol | |
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| ID | 6183523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1036602 |
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| End bp | 1037426 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671782 |
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| Product | Uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_001797958 |
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| Protein GI | 171463845 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.843372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.534703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTA AAACCATCAT TGTCACGAGG CCGAGCGGTC AAGCTCGTCA ATTGATTGAG
GTGCTCACAA ATGCAATTGA AAAAAGCGGT GTTGCTAAGC GAAGCCTGCC AGAGATACTG
TCATTGCCTT TGCTCACGAT TGTTCCGAAG TCGGATGAGC ATTTGGCCGA CCATATAGCA
ACCGTCCTAG GCGATGCTGA CTTGGTTATA TTTGTTAGTC CAAATGCCAT CGAGAGTGTA
ATGCGTCTAT TGGAGCGGGA TTGGCAAGAC TTTTCAAAAT CAATTATTCC GATTGGCGTG
ATGGGTGGAA GCAGCCATCA AGCGTTAAAA AATCATGGCA TTGGATTAGA AGAAAGTCCG
ACCCCAATCA TCATCCCTAA AAATAATGAA AACTGGGACT CTGAAGGTTT ATGGCAGGAG
CTTGGATCCT TTGATTGGAA TTGGCAGAAC AAGAAAGTCG TGATCTTTAA GGGTGAAGGC
GGCCGTGATT GGTTGGCTGA TGCCTTGAAA AATGCAGGCG CTACTGTGGA GGCAATTTCA
ACCTATAGCC GCATACCTCT CGATCTTGAT AATCCTTCTT GGCATGCCAT ACGGCAGATG
GATATGAGCA AGTCACTCTG GTTGCTAACT TCATCTGAAG CGGTACGCTA TCTTGGTGAG
GTGATGAAGG ATCAGTTCAT CCAGAGCCTG AAGACTGCAA GTGCCTTATG TCCACATCAC
AATATTGCTG ATGCAGCTGA GTTGATTGGG TTTGGTGAGG TCTTTACCAG TGAGCCTGGT
GACGAAGCAT TGGTGAAGTC AACTCTGGCT TGGTTGGCTA TTTAG
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| Protein sequence | MSTKTIIVTR PSGQARQLIE VLTNAIEKSG VAKRSLPEIL SLPLLTIVPK SDEHLADHIA
TVLGDADLVI FVSPNAIESV MRLLERDWQD FSKSIIPIGV MGGSSHQALK NHGIGLEESP
TPIIIPKNNE NWDSEGLWQE LGSFDWNWQN KKVVIFKGEG GRDWLADALK NAGATVEAIS
TYSRIPLDLD NPSWHAIRQM DMSKSLWLLT SSEAVRYLGE VMKDQFIQSL KTASALCPHH
NIADAAELIG FGEVFTSEPG DEALVKSTLA WLAI
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