| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1193 |
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| Symbol | |
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| ID | 6182971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1032783 |
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| End bp | 1033376 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671777 |
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| Product | Pyridoxal 5'-phosphate synthase |
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| Protein accession | YP_001797953 |
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| Protein GI | 171463840 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.120048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACTCCA TTGCTCAACT CCGCAAAAAC TACACCTTTG GCCAGCTTTC AGAGACCGAG
GGTCCTCAGG ACCCATTGCC GCTTTTTCAG CTCTGGTTTG AACAGGCGAT TAAAGCGGAG
TGCCCGGAGC CCAACTCCAT GACTCTAGCA ACAGCAGATC AAGCCGGAAA TCCATCAACC
CGTATTGTCT TACTAAAAGG CGCAGACCAA AACGGCTTTA CCTTTTTTAC TAATTGCGGA
AGCCAAAAAG GCCGTGATTT AGTAGTGCGC CCACAAGCGG CACTACTTTT CCATTGGCAC
AAATTAGAGC GCCAAGTACG TATTCAGGGA ATTGTTGAGA AAGTAAGCGC TGCCGAGAGC
GATGAATACT TTCATTCCCG TCCACCCGCT TCCAGAATTG GGGCTTGGGC CTCACCTCAG
AGCGCCGCAA TACCAAACCG CGAATTCTTA GAAGATGCAG AGAAACGCTT CACGGCTGAG
TTTGGCGATA AACCCCTCGC CCAGAACACT GGGGCCAACA CTTCGGCGGC GATTGCTTAT
ATAAATAACA AACCGAATCC TCTTGCCTTG TATTGGTTTG GCAAAGATAA GTAA
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| Protein sequence | MDSIAQLRKN YTFGQLSETE GPQDPLPLFQ LWFEQAIKAE CPEPNSMTLA TADQAGNPST
RIVLLKGADQ NGFTFFTNCG SQKGRDLVVR PQAALLFHWH KLERQVRIQG IVEKVSAAES
DEYFHSRPPA SRIGAWASPQ SAAIPNREFL EDAEKRFTAE FGDKPLAQNT GANTSAAIAY
INNKPNPLAL YWFGKDK
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