Gene Pnec_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1180 
Symbol 
ID6183233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1020977 
End bp1021345 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content44% 
IMG OID641671770 
Producthypothetical protein 
Protein accessionYP_001797946 
Protein GI171463833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.142873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCCTAC TTGCCGCTTT GGGGAGCGCT CTTGCGCATT CTCAAATCAA TGAGGTAAGC 
CAAGAAGATA TCAAGGCACT TATTTCTAAG TCCTTTGATC AGCCTAACTT AAAAGTTAAA 
ACCAGTCCCA TTGTGATTGA GGGAAAAGTC GCCATTGCAG ATTGGACTCA AGGCCAGAAG 
GGCGGTCGTG CTTTGCTACG TAGAAAGCAT AACGATTGGG AAATCATTGC CTGCGGAAGA 
TCTGGCTTTA AAAATCCCGA AGGCATTGCT GCAATTGGCA TTTCAAAAGA AATCGCACAA 
AACATTACCG CAAAACTCAG TGAGGCCGAA AAAAGAAATC GCACAAAACA TTACCGCAAA 
ACTCAGTGA
 
Protein sequence
MFLLAALGSA LAHSQINEVS QEDIKALISK SFDQPNLKVK TSPIVIEGKV AIADWTQGQK 
GGRALLRRKH NDWEIIACGR SGFKNPEGIA AIGISKEIAQ NITAKLSEAE KRNRTKHYRK 
TQ