Gene Pnec_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1175 
Symbol 
ID6183675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1018380 
End bp1018556 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content40% 
IMG OID641671769 
Producthypothetical protein 
Protein accessionYP_001797945 
Protein GI171463832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.268607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGTG GCGCCTTGGT GGTTATGTGC CCTATGTGTC TGAAGCAAGC AGGTTATACC 
GAATCTGACT TAATTCCAGG CATTAAGATT GGTAGTCCTA AGTTAACTGG TGACACTTTA 
TTCAAGGATG GCACTCAAGA CAATGAGTTG GTAATTGAGC ATTTTTTGAA TTTTTAA
 
Protein sequence
MSSGALVVMC PMCLKQAGYT ESDLIPGIKI GSPKLTGDTL FKDGTQDNEL VIEHFLNF