Gene Pnec_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1164 
Symbol 
ID6183791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1010155 
End bp1010691 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content43% 
IMG OID641671760 
ProductInorganic diphosphatase 
Protein accessionYP_001797936 
Protein GI171463823 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.289996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTCG ACAAAGTCAA GTCAGGTAAA AAGATCCCTG ACAGCTTCAA CGTCATTATT 
GAAATCCCAA TGAATGCGGA TCCAATCAAG TATGAAGTAG ATAAAGAGAG TGGCACAATT
TTCGTTGACC GTTTTATGGG TACTGCAATG CACTATCCAT GTAACTATGG ATATATCAAT
AAAACAATCG CTGGTGATGG CGACCCTGTT GACGTTCTCG TGATTACTCC ATTCCCGCTG
ATCCCAGGCG TCGTTGTTAG CTGCCGTGCA ATCGGTGTAT TACAAATGGA AGATGAAGGC
GGTCAAGACG CTAAATTGTT AGCAGTGCCT GAAGACAAAA TTTTGCCTAT CTACACTCAC
TGGCAAAAAC CAGAGGACAT TAATCCTTTA CGCTTAAACC AAATTCAACA CTTCTTCGAG
CACTACAAAG ATCTAGAGCC AGGTAAATGG GTAAAAGTTA AGGGTTGGGG TGGCGTTGCA
GAAGCTCATC AAGAAATCTT GGAAGGCATC GATCGCTACA ACAAAGAAAA CAAGTAA
 
Protein sequence
MGLDKVKSGK KIPDSFNVII EIPMNADPIK YEVDKESGTI FVDRFMGTAM HYPCNYGYIN 
KTIAGDGDPV DVLVITPFPL IPGVVVSCRA IGVLQMEDEG GQDAKLLAVP EDKILPIYTH
WQKPEDINPL RLNQIQHFFE HYKDLEPGKW VKVKGWGGVA EAHQEILEGI DRYNKENK