Gene Pnec_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1161 
Symbol 
ID6183738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1005641 
End bp1007953 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content49% 
IMG OID641671758 
Productcell divisionFtsK/SpoIIIE 
Protein accessionYP_001797934 
Protein GI171463821 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.112052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAA CCTCATACCC GAAGTCCAAG GCTCCATTGA GCCCCGAGCC CCCAGAAAAT 
GGCGGGCAGG GCAGGATGCC CCGCCTCTTA TTAGAGGCTC GCTGGTTCAT CTCCCTGGGC
CTCTGCCTGG GCTTATTTGC CGTTTTGCTG ACTTATTCCA AGGCCGATCC GGCGTGGTCC
CACGCTAGTT TTGAGGCTCC CAAGAACCTG GGTGGTCGTT TTGGGGCTTA TTTTGCGGAT
TTAATGCTGT ACGTCTTTGG TATTTCCGCC TTTTGGTGGG TAGTTCTGTT TGGGCGCCGC
GTTCTTAATG GTTGGCGTGA GCTTTGGAGT ATTCCCTTGC CGGCGGATCC TGACGCTAAG
CCAGACTCAT TATTGATGCG TTGGCTGGGC TTTGGCCTAA CCTTAGCTTG CAGCATGGGC
CTTGAGTCCA TTCGGATGCA TTCGCTGTCC TGGGAGCTTC CTAGACCACC TGGCGGCATT
TTGGGGGAGC TCATTGGTGA TCCATTGCAA ATGTCGCTTG GATTTACCGG TGCTACTCTC
GTATTGTTAT TCGGCCTATG TGCCGGCCTC TCTCTGTTCC TACATTTTTC TTGGTTAGAT
GTTGCTGAAA AAGTAGGACG TTTCTTAGAG GTTTCTTTTC ACCGTATTCG TGAGCGTCGC
GATAGCGAAG AAGATCGTAA GCTAGGTGAG GCCGCCGCTG AAGAGCGCGA AGAGTTTGTA
GAAGAATTTC GCGGTCGCGT TGAAGTTGCT GCACCAGTGC AGATTGTGCG TGCACCAGTA
GAGATTCCAA AAAGTGCTCA GGTTGAGCGT GAGAAACAAC AACCTTTGTT TGTAGACATT
CCAGATTCAG AGTTGCCGCC ACTCGCATTG CTTGATCCAG TGCCTGAAGC AAAAGAAACG
ATCTCTGCTG AAGTATTGGA ATTTACTTCC CACTTAATTG AGCGCAAGTT AGCAGAATTT
AATGTTCAGG TAACAGTCAT CGCTGCTTAT CCCGGTCCAG TAGTGACGCG TTACGAGATT
GATCCTGCTG TTGGCGTGAA GGGTAGTCAG ATTGTGAATC TCTCACGTGA CTTGGCGCGT
TCACTCGGTG TAGTCAGTAT GCGTGTGGTC GAAACGATTC CCGGTAAGAC CTGTATGGTT
TTGGAATTGC CAAATCCAAC ACGTCAATCT GTTTATCTGT CTGAAATTCT GACTTCCCAG
GTTTATAACG ATAACCATTC ATTGTTGACT TTGGCTTTGG GTAAAGATAT TTCTGGCAGC
CCTATGGTGG CTGACTTAGC GAAGATGCCG CACTGTTTGG TTGCTGGTAC TACCGGAGCT
GGTAAGTCTG TTGGTATTAA TGCCATGATT TTGTCGATCC TCTTCAAGGC AAAGCCCGAT
GAAGTGCGTT TAATCATGAT CGATCCAAAG ATGCTAGAAA TGGCAATCTA CGACAAGATC
CCGCATTTGT TGTGCTCAGT AGTTACTGAT ATGAAGCAGG CTTATAACGC TCTGAATTGG
GCGGTTAATG AGATGGAGCG CCGCTACAAA CTGATGAGTA AGTTTGGGGT GCGTAACTTA
GCAGGCTTTA ACAAAAAGAT TTTAGAAGCA GAAGAAAAAG GTGAAAAGCT CACCAATCCA
TTTAGCTTGA CTCCAGATGA TCCGGAGCCA ATCTACAAAG CGCCAGTGAT TGTCATTGTG
ATTGATGAGT TGGCTGACTT GATGATGGTT TCTGGCAAGA AGATTGAAGA GTTGATTGCT
CGTATTGCGC AAAAAGCTCG TGCTGCTGGC ATCCATTTGG TTCTAGCAAC TCAGCGCCCA
AGCGTTGATG TGATTACTGG CTTGATTAAA GCCAACGTAC CAACCCGCAT CTCCTTCCAG
GTCAGCTCGA AGATCGATAG CCGTACGATT TTGGATCAAC AGGGCGCGGA AGCATTACTC
GGTATGGGTG ATATGCTCTA CATGGCGCCA GGCACAGGCT TGCCAGTACG TGTACACGGC
GCCTTTGTGT CTGACGACGA GGTACATCGC GTGGTTGAGT GGCTCAAAGA GAAGGGCGAG
GCCAACTATA TCGATGGTAT ACTCGAAGGT GCTGATGAAT CCAATGTCGA TGCATTAACA
GGTGAGAGTG GCGGTGAAGC CGACCCATTC TACGATCAAG CTGTCGCCAT TGTTCTCGAA
AACAAACGCC CATCCATTTC TTTGGTACAA CGCCATCTGC GCATTGGCTA TAACCGCGCA
GCACGTCTCC TTGAGAATAT GGAAAAAGCA GGTCTCGTAT CGAAGATGGG TAACGGTGGT
AATCGCGAGA TTTTGCATCG CCCTTCAGAA TAA
 
Protein sequence
MARTSYPKSK APLSPEPPEN GGQGRMPRLL LEARWFISLG LCLGLFAVLL TYSKADPAWS 
HASFEAPKNL GGRFGAYFAD LMLYVFGISA FWWVVLFGRR VLNGWRELWS IPLPADPDAK
PDSLLMRWLG FGLTLACSMG LESIRMHSLS WELPRPPGGI LGELIGDPLQ MSLGFTGATL
VLLFGLCAGL SLFLHFSWLD VAEKVGRFLE VSFHRIRERR DSEEDRKLGE AAAEEREEFV
EEFRGRVEVA APVQIVRAPV EIPKSAQVER EKQQPLFVDI PDSELPPLAL LDPVPEAKET
ISAEVLEFTS HLIERKLAEF NVQVTVIAAY PGPVVTRYEI DPAVGVKGSQ IVNLSRDLAR
SLGVVSMRVV ETIPGKTCMV LELPNPTRQS VYLSEILTSQ VYNDNHSLLT LALGKDISGS
PMVADLAKMP HCLVAGTTGA GKSVGINAMI LSILFKAKPD EVRLIMIDPK MLEMAIYDKI
PHLLCSVVTD MKQAYNALNW AVNEMERRYK LMSKFGVRNL AGFNKKILEA EEKGEKLTNP
FSLTPDDPEP IYKAPVIVIV IDELADLMMV SGKKIEELIA RIAQKARAAG IHLVLATQRP
SVDVITGLIK ANVPTRISFQ VSSKIDSRTI LDQQGAEALL GMGDMLYMAP GTGLPVRVHG
AFVSDDEVHR VVEWLKEKGE ANYIDGILEG ADESNVDALT GESGGEADPF YDQAVAIVLE
NKRPSISLVQ RHLRIGYNRA ARLLENMEKA GLVSKMGNGG NREILHRPSE