Gene Pnec_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1156 
Symbol 
ID6184045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1002201 
End bp1002482 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content39% 
IMG OID641671753 
ProductMltA-interacting MipA family protein 
Protein accessionYP_001797930 
Protein GI171463817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0428917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAC TAATACAGCA AAAAACAATG AAATCACTCA TGTTTTTGCT TGCTTTTGCT 
TGGTCAATTC TGTGCTTTGC AATTGATAGC CTGATTAGCC CTCTTCCAGA CCACATTGTT 
GGTGATATTG GCGGGGCAAT TTACACATCA AATTTGCACA TAGGCACCGA AGGAACCCAG 
TCACTAGTTT TACCTTATGG GTTTTTTGAC TACAAACACT TTTTTCTTCG AATAGATCAA 
GTTGGCATTA AAACTGTTGA GATGGGCTAT GGCTATTTAT AG
 
Protein sequence
MSALIQQKTM KSLMFLLAFA WSILCFAIDS LISPLPDHIV GDIGGAIYTS NLHIGTEGTQ 
SLVLPYGFFD YKHFFLRIDQ VGIKTVEMGY GYL