Gene Pnec_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1135 
Symbol 
ID6182915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp989150 
End bp989350 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content43% 
IMG OID641671738 
Productmembrane protein of unknown function 
Protein accessionYP_001797915 
Protein GI171463802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.0708618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCTTTG CAGATGGTGG CTCACTCTTA ATTGCTGCTC TGCTCTTGGG TTTTGCAAAC 
GCGATTGTTA AACCATTACT GATTCTATTC ACTCTGCCAC TCACAGTGGT AACCATGGGT 
CTTTTCTTAC TCGTGATTAA TGCATTGGTA TTAATGCTCG TTTCTGCAGT AGTGAGTGGC 
TTTACGATCT CTAGTTTCTG A
 
Protein sequence
MRFADGGSLL IAALLLGFAN AIVKPLLILF TLPLTVVTMG LFLLVINALV LMLVSAVVSG 
FTISSF