| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1132 |
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| Symbol | |
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| ID | 6183456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 988156 |
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| End bp | 988569 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641671735 |
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| Product | protein of unknown function DUF132 |
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| Protein accession | YP_001797912 |
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| Protein GI | 171463799 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1569] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | [TIGR00305] probable toxin-antitoxin system toxin component, PIN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.986336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.107749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGTAG TGGTTTTTGA TACTAATATC TTATTAGACC TCTTTGTCTT TAATGACTTT
AGAGCGCTCC ACCTAAAGCA AGCCCTTGAT GAAAGCAAAA TCAATGCGCT TGCAACACCC
GCTACATTGG GAGAGTTTGC TGACGTTATT GCAAGACCCC TATTCTCATT GAATCAAGAC
CAGCAAGAAC AAATCCGCTC GCAATGGCAT GGTTTGGTAA AGGTTTTAGA GGACTCAAAA
CTTATCAAGG CGCCGTGGTT ATGCCAAGAT CCTGATGACC AAGTCTTTTT AGATCTCGCA
TTCACTGCAA AACCCTGTAC CTTAATCAGC AAGGACAATG AAGTGCTCCG ATTCACTCAT
AAAGCCGTAA TGGAACAGGT TCTAATTACC GCAGATTACA AGCTATTTAA TTGA
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| Protein sequence | MKVVVFDTNI LLDLFVFNDF RALHLKQALD ESKINALATP ATLGEFADVI ARPLFSLNQD
QQEQIRSQWH GLVKVLEDSK LIKAPWLCQD PDDQVFLDLA FTAKPCTLIS KDNEVLRFTH
KAVMEQVLIT ADYKLFN
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