| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1130 |
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| Symbol | |
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| ID | 6183897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 985868 |
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| End bp | 987481 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671733 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001797910 |
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| Protein GI | 171463797 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0718061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTA TTACTGAATT GCGTCTACCT ATTGACCATG CTTCTGAAGC CGTGGAGCGG
GCGATTCTGA AACGCTTGGA TTTGAATGCT AAAGACTTAA TTCAGTTTGA TGTGTTTAAG
CGTAGTTATG ACGCCCGAAA AAACGTCTCC TTATCTTTTA TCTACACCGT AGATTTATCC
GCAAAGAATG AAAAGGCTTT GCTAAAGAAA TTTGCTGGTG ATATTCATGT AAGGCCATCC
CCGGATACGA GCTACCATTT TGTGGCGAAA GCCCCTGAGT CCATCGACCT AGGAAAAGCG
CTACGCCCAG TAGTAATTGG TTTTGGCCCT TGCGGTATTT TTGCCGCCTT AGTGCTAGCG
CAAATGGGCT TCAAGCCCAT CGTTCTTGAG CGCGGTAAAA AGGTTCACGA ACGCACTCAG
GATACTTGGG GTTTATGGCG TAAAAATACA TTGAACCCAG AGTCCAATGT CCAGTTTGGT
GAGGGTGGGG CTGGTACATT TTCAGACGGT AAGTTGTATA GCCAAATAAA AGATCCCAAG
TTTTACGGGC GCAAAGTCAT TAATGAGTTT GTAAAGGCGG GTGCTCCAGA AGAAATTACT
TATGTAGCTA AGCCGCACGT TGGCACTTTC CGCTTGGTTG GGGTGGTTGA GAAGATGCGC
CAAGAGATTA TTGATCTAGG CGGTGATATT CGGTTTTCGC AAAAGGTCAT TGGTTTTAAT
ATCGATAGTG AGCAAATTAC CGGGGTCAAG ATTGAAGGGC AGCCCGATTT GCCTGCAAGT
CATGTCATCT TGGCTTTAGG GCACAGCGCA CGCGATACCT TTGAGGCGCT GCATCATGCC
GGTGTCTATA TGGAAGCTAA ACCATTCTCG GTAGGATTTC GGATTGAGCA TCCACAATCA
CTCATTGATA AAGCGCGCTT GGGCCCTCAT GCAGGTAATG AACTGATCGG CGCGGCAGAC
TACAAATTAG TACATCACGC TAAAAATGGT CGTTCGGTCT ATAGTTTTTG CATGTGCCCT
GGCGGCACTG TTGTGGCTGC TACATCTGAA CCCAATCGGG TTGTGACCAA TGGGATGAGT
CAATATTCTC GCAATGAACG CAATGCTAAT GCTGGCATTG TTGTGGGTAT TACCCCAGAG
GACTATCCCT GTGGCCCGTT AGCGGGAATC GAATTTCAAA GGGCAATAGA GTCCAAAGCC
TTTGAGTTGG GTGGTGGAAC CTACGAAGCT CCCGGTCAAT TGATCGGCGA TTTTTTGAAT
GGCAAACCTT CTACTGAATT CGGTAGTGTG TTACCATCCT ATAAACCTGG TGTTCATCTG
ACGGATCTTT CGGAGAGCTT GCCTGCCTAT GTCATCGAAG CAATTCGAGA GGCGATTCCA
GCATTTGAGA AGCAGATCAA AGGTTTCTCA ATGAAAGAGG CTGTATTGAC AGGTGTTGAG
ACACGTACAT CCTCTCCATT GCGGATTACC CGTGGCGCCA ATTATCAAAG TTTGAACATC
AAAGGTCTTT ATCCGGCTGG TGAGGGCGCT GGCTATGCCG GAGGAATCTT GTCTGCAGGG
GTGGATGGGA TTAAAGTAGC GGAAGCAGTA GCCCTAGACT ATTTGTCAAA GTAA
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| Protein sequence | MIRITELRLP IDHASEAVER AILKRLDLNA KDLIQFDVFK RSYDARKNVS LSFIYTVDLS
AKNEKALLKK FAGDIHVRPS PDTSYHFVAK APESIDLGKA LRPVVIGFGP CGIFAALVLA
QMGFKPIVLE RGKKVHERTQ DTWGLWRKNT LNPESNVQFG EGGAGTFSDG KLYSQIKDPK
FYGRKVINEF VKAGAPEEIT YVAKPHVGTF RLVGVVEKMR QEIIDLGGDI RFSQKVIGFN
IDSEQITGVK IEGQPDLPAS HVILALGHSA RDTFEALHHA GVYMEAKPFS VGFRIEHPQS
LIDKARLGPH AGNELIGAAD YKLVHHAKNG RSVYSFCMCP GGTVVAATSE PNRVVTNGMS
QYSRNERNAN AGIVVGITPE DYPCGPLAGI EFQRAIESKA FELGGGTYEA PGQLIGDFLN
GKPSTEFGSV LPSYKPGVHL TDLSESLPAY VIEAIREAIP AFEKQIKGFS MKEAVLTGVE
TRTSSPLRIT RGANYQSLNI KGLYPAGEGA GYAGGILSAG VDGIKVAEAV ALDYLSK
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