Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1124 |
Symbol | |
ID | 6183316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 979717 |
End bp | 980697 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671728 |
Product | heat shock protein DnaJ domain protein |
Protein accession | YP_001797905 |
Protein GI | 171463792 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.405615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA GGGATTACTA CGAAACACTT GGCGTTGCTC GAGGCGCTAC TGAAGCTGAA ATCAAAACAG CCTATCGCAA ACTAGCGCGT AAATATCATC CAGATGTTAA TAAAGAAGTT GGCGCCGAAG AACAATTTAA GCAAATTGGC GAGGCTTATG CTGTTTTAAA AGATACTGAA AAACGCGCTG CCTATGATCG CTTTGGTGAG CACTGGAAAA ACGGCCAAGA CTTTACGCCT CCTCCGAATT GGAATGAAGG CTTTGAATAT TCTGATGCTG GATTTGGTGG TGGCCACCCT GGATATGGCG GTGGCTTTGA GGGTGATCAA AGCGAATTCT TTGAGTCACT CTTTGGCAGA GGCAAACATC GTCAAGGTGG ACGTGGCGGC CATAGCCGTC AGGGTAAGAA TTTCAAAGGT CAAGATCATC ACGCAAAGAT TTTGATCGAT CTGGCAGATG CCTATAACGG CGCCAAACGC ACTATCTCCC TACACATGCC TACACAAGAT GCGAGCGGTC ATGTCAGCAC ACAAGAGCGC AAGTTAGACG TCAGCATTCC GAAAGGTATC AAGGCCGGAC AAAACCTCCG CCTCGCTGGT CAAGGCGGTC CCGGAGTTGG AGAAGGCCCT GCCGGTGATT TATATTTAGA AATCGATTTT CATCCAACCC CCATCTATCG CGTAGAAGGT AAGGATGTCT TCATCGATAT TCCTTTGGCG CCTTGGGAAG CAGCTTTGGG CACTTCAATC AATATACCCA CCCCAGCAGG CAGCACACTA GAACTAAAAA TCCCAGCAGG AACTCTTGCC GGTCGCAAGA TGCGTCTCAA AGGGAAGGGG ATTCCTAGCT CAGAGCTTGG TGATTTATAT GTAGTGCCTA CTATTACCCT ACCACCAGCA GAAACGGATG CTCAAAAAGA AGCCTATCAA AATTTTGAAA AAGCTTTTGA TTTCAACCCT AGATCTCACC TGAAGGGATG A
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Protein sequence | MKFRDYYETL GVARGATEAE IKTAYRKLAR KYHPDVNKEV GAEEQFKQIG EAYAVLKDTE KRAAYDRFGE HWKNGQDFTP PPNWNEGFEY SDAGFGGGHP GYGGGFEGDQ SEFFESLFGR GKHRQGGRGG HSRQGKNFKG QDHHAKILID LADAYNGAKR TISLHMPTQD ASGHVSTQER KLDVSIPKGI KAGQNLRLAG QGGPGVGEGP AGDLYLEIDF HPTPIYRVEG KDVFIDIPLA PWEAALGTSI NIPTPAGSTL ELKIPAGTLA GRKMRLKGKG IPSSELGDLY VVPTITLPPA ETDAQKEAYQ NFEKAFDFNP RSHLKG
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