Gene Pnec_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1116 
Symbol 
ID6183205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp975034 
End bp975357 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content43% 
IMG OID641671724 
Producthypothetical protein 
Protein accessionYP_001797901 
Protein GI171463788 
COG category[S] Function unknown 
COG ID[COG4949] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.343996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACTG AAAAAGACGG CATTTTTCTG GAAGAGCTTT CTCGTTTAGC TTCCCGTATA 
GAACAATGGA TTTCTGAGTA TGGGCTTCAC TTTACTGCGG CTGAAGCCTA TAGTCAGCTA
CTTTCAAAAA ATTTACTGGA ATTAAACGAA ACATCCCTTC TGGGGGTGCA AACCTTGTCA
GAGTTTATGG ATCGACGTTT TCAGCCGGCC ATGGGGACAT GTATTTGGAC CCAACGACGC
TTGCGTGAAT TATCGGATCG CATTTCTAGG ACAACACAAA CCCTGAGAAC TCGTATTGAG
TTTGTAAATG AGCAGCAATC GTAA
 
Protein sequence
MNTEKDGIFL EELSRLASRI EQWISEYGLH FTAAEAYSQL LSKNLLELNE TSLLGVQTLS 
EFMDRRFQPA MGTCIWTQRR LRELSDRISR TTQTLRTRIE FVNEQQS