| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1106 |
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| Symbol | |
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| ID | 6183143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 967355 |
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| End bp | 968434 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671716 |
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| Product | MmgE/PrpD family protein |
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| Protein accession | YP_001797893 |
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| Protein GI | 171463780 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACTAG TTGATTGGTT TGACTCGGCT ATTGCCGGCA AAGGATCACG ACCAGTTGAG
CTTATTACCC AATTTGCACA GAACATGAGC GGGTTTAATG CAAGCAACCC CGGACTCTCT
GAGATTCTTG TCTCTCGAAA AACATCTAGC CCATTTTTGG CGGCGATGGC TAATGCAGCG
GCATCACACG TTGCAGAGCA AGATGATGTT CACAATGGCT CTGTCTTTCA TCCAGCAACC
GTGGTATTTC CTCCGGCACT TGCTTGCACA CAAGCCATTG GCGCATCTGG CGAGGATCTT
TTGGTTGCTG CTGTAGCTGA CTATGAAGTG GGCATTCGGG TGGGTGAATT TTTAGGTCGC
TCTCATTACA AGGTATTTCA TACAACCGGC ACCGCTGGCA CATTAGCTGC CGCTGCAACT
GTTGGTCGCT TACTTAAACT AAATCCTGAG CAAATGCTCA ATGCCTTTGG TTCTGCAGGA
ACGCAATCAG CCGGCCTTTG GGAATTTCTG CGGGACGCTG CGGATTCCAA ACAACTTCAC
ACTGCGCACG CAGCTTCAAC CGGTTTAATG TCCGCCTATA TTGCACAAGC TGGATTTACC
GATGCAGAAC ATATCTTAGA AGGCAAGCAA GGTCTGACAG CAGGCATGTC TAGTGATAGT
GACCCAAGTA AGTTGATAGA TCGCCTAGGT ACATGCTGGG CTTTAGCCGA AACCAGCTTT
AAGTATTACG CTTCATGCCG CTATACCCAC CCTGCTGCTG ACGCATTGTT GCAAGTAATG
CTAGCGAATC AATTATCGCC CAAGGATATT GCCAAAGTAG AGACACTGGT TCATCAAGGT
GCGATAGATG TTTTAGGCCC AGTCACCGAT CCAGCCACTG TGCATCAATC TAAGTTCTCA
ATGGGTACAG TGCTCGCATT AGTTGCGCAT TATCAATTTG CTGACCTACA GGAATTTGAC
AAACATTTTC ATGATGACGA AATTTGCGCA TTCCGTGAGC GCGTTTTTAT GACACTGGAT
CCCGAGGTGG ATGGAGCATA CCCGCAGCGT TGGATTGGAA AAGTCAAAGT GCATTTATAA
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| Protein sequence | MKLVDWFDSA IAGKGSRPVE LITQFAQNMS GFNASNPGLS EILVSRKTSS PFLAAMANAA
ASHVAEQDDV HNGSVFHPAT VVFPPALACT QAIGASGEDL LVAAVADYEV GIRVGEFLGR
SHYKVFHTTG TAGTLAAAAT VGRLLKLNPE QMLNAFGSAG TQSAGLWEFL RDAADSKQLH
TAHAASTGLM SAYIAQAGFT DAEHILEGKQ GLTAGMSSDS DPSKLIDRLG TCWALAETSF
KYYASCRYTH PAADALLQVM LANQLSPKDI AKVETLVHQG AIDVLGPVTD PATVHQSKFS
MGTVLALVAH YQFADLQEFD KHFHDDEICA FRERVFMTLD PEVDGAYPQR WIGKVKVHL
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