| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1103 |
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| Symbol | |
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| ID | 6184226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 963472 |
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| End bp | 964548 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671713 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001797890 |
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| Protein GI | 171463777 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGTC AAATGCGCGC CTACATCTTT AAGCGGTTGC TCTTAATGAT TCCCACTATC
TTGGGTGTAT TGACTCTGAC TTTTGCAGTG GTGCAATTTG TTCCTGGCGG ACCTGTTGAG
CAAATGGTTC TGGAGTTAAA AGGCAAGGGC AGCGCAGCTA CTGGTGGTTC GGAGTCATCG
GGTTCGGGTG AGACCTATCG CGGTCGCCAA GGTGTGGATG CTCAGCGTCT AGAAGAAGTG
AAAGCTTTGT ACGGATTTGA TAAGCCACCT CTTGAGCGCT ATTTCATGAT GTTAGGACGC
TTTGCACGAT TTGACTTGGG GCAAAGCTAT TACCAGCACG AGAGTGTTTG GCGCTTGGTG
GTCTCAAAAT TGCCGGTATC AATCAGTATC GGATTGTGGA CCTTCTTTAT CACTTATTTA
GTTTCCATTC CATTGGGCAT CGCTAAAGCG GTGCGTGATG GCTCACGCTT TGATGCCATC
ACTAGTAGCA TGATTCTGGT TGGTTATGCG ATTCCGGGAT TTGTGCTCGG CGTCCTATTG
CTTGTCGTCT TTGGGGGCAG TAGTTTCTTG CAAATATTCC CGTTGCGAGG TTTAACTTCT
GATAATTGGA GTGATCTCAG TCTTATTGGC AAGGTCATAG ATTACTTGTG GCACTTAGTT
TTGCCAATTA CCGCATCCGT TTTTGGAAGT TTTGCTGTGG TCACTATGTT GACCAAGAAT
TCATTTCTCG AAGAGATTCG CAAACAGTAT GTTTTGACGG CACGAGCAAA GGGGTTAACT
GAGAAGCAAG TGCTATGGAA GCACGTATTT CGCAATGCGC TGTTACCGTT GGTAACGGGT
TTCCCTGCGG CATTTATCGG CGCTTTCTTT ACAGGCTCCT TGTTGATAGA GACCCTGTTC
TCTTTGGATG GACTTGGCTT GCTTTCTTAT GAGTCAGTGA TGCGGCGTGA CTACCCTGTG
GTATTTGGTA CTTTGTACTT ATTTACTTTG ATTGGTTTAT TTACGAAGCT CATTTCTGAT
CTTTGCTATG TATACATAGA CCCACGCATA CAGTTTGGTG CGGGAGGTGG CTCATGA
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| Protein sequence | MQGQMRAYIF KRLLLMIPTI LGVLTLTFAV VQFVPGGPVE QMVLELKGKG SAATGGSESS
GSGETYRGRQ GVDAQRLEEV KALYGFDKPP LERYFMMLGR FARFDLGQSY YQHESVWRLV
VSKLPVSISI GLWTFFITYL VSIPLGIAKA VRDGSRFDAI TSSMILVGYA IPGFVLGVLL
LVVFGGSSFL QIFPLRGLTS DNWSDLSLIG KVIDYLWHLV LPITASVFGS FAVVTMLTKN
SFLEEIRKQY VLTARAKGLT EKQVLWKHVF RNALLPLVTG FPAAFIGAFF TGSLLIETLF
SLDGLGLLSY ESVMRRDYPV VFGTLYLFTL IGLFTKLISD LCYVYIDPRI QFGAGGGS
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