| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1101 |
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| Symbol | |
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| ID | 6183047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 960816 |
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| End bp | 962453 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671711 |
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| Product | ABC transporter related |
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| Protein accession | YP_001797888 |
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| Protein GI | 171463775 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGC TACGTTACGA AGACTTGTGC ATCTCTTTTG GAGAGGGTCG CCGCGAAAAG
TTTGCTGTAA ATCATCTCGA TTTAGAGATC GGCATCGGCG AACGTGTTGC CTTAGTTGGG
GAATCGGGCT CCGGTAAGAC GCTCACAGCA CTAGCTCCAT TGAGGCTTGA ATCAGAGGGT
GCAAAAGTTT CTGGAAAGAT TCTCTGGAAC AGAAAAGATG GAAAAGGTGA GGTGGATTTA
TTGTCCGTGC CGATTCAGGA CATTCGGGAG ATTCGTGGGC GTGAAATTGC CATGGTGTTT
CAGGAGCCAA TGACCGCTTT GAATCCGCTC TTTACCGTTG GCAATCAAAT TATTGAAGCG
GTACAGATCT TTCAGCCTTT GATTTCTAAA TCTGATGCGA TTGATGCTGC GGTTGACTTG
CTCCGCAAGA CGGGAATTCC TGAGCCTGAA CGCCGTTTCC ATTCTTATCC ACATCAACTC
TCTGGTGGTC AGCGACAGCG GGCCATGATT GCGATGGCCT TGGCATGCAA GCCACGCCTT
CTCATTGCGG ATGAACCTAC GACAGCTTTA GATGTCAGTT TGCGATTGCA GATCCTTGAT
TTGCTGAAAG AATTGCAGGA GGAATCCAAA GATGAAGGTG GCATGGGAAT TTTATTAATT
ACCCATGATC TCAATTTGGT GAAGCATTTT GCACAGCGTG TAGCAGTCCT GAACCAAGGT
AATTTGATGG AGTCTGGTTC TACTAAGCAA GTCTTTGAAC ATCCTGAAGA TCCCTATACC
CGTGCCTTAG TAAATAGTGA GCCTATTCGT GACTTAGTGC CATTGATGCC TTTGGCCCCA
GTGCTATTAA AAACAGAAGA ACTTTCGGTA GCCTACCCAA GCTCTGAATC AGTTTCTTGG
TTTAAAAAAG CGCCGCCACA TAAAGTTTTG AAAAAAGTCA GCTTTGCATT AAAGCAGAGT
CAAACCATTG GTGTTATTGG TGAGTCTGGT TCTGGCAAGA CAACTTTAGG CATGGCTGTT
CTTGGCTTGC TAGGGGACTC ATCAGCAGAA GTATCTGGTG ATGTTGATGT TCTTGGCAAT
GATTGGCAGA AACTAAAACC AGTAGAGAGA AGGGCGCTAC GCTCGAGCTT GCAAGTGATC
TTTCAGGATC CTTTTGGATC TTTATCACCA CGCATGAATG TATTGCAAAT TGTTTCTGAG
GGTTTGGATG TACATTTTCC TAAGCTATCG ACAGCAGAAC GTGAAACTCG CGTGGTGGAT
ATGCTCAAAG AAGTGGGCTT AGATCGCTCT GCGCTCCTAC GTTATCCTCA TGAGTTTTCT
GGTGGCCAGC GTCAGCGGAT TGCGATTGCA CGCGCATTAA TTTTGCGCCC TCAAATTTTG
GTTTTAGATG AGCCGACTTC TGCGTTAGAT GTTTCTATTC AGAAGCAGGT GCTGGCTTTG
TTGGCTGAGC TACAGAAAAA GTACAACTTA GCCTACCTCA TGATTAGTCA TGATTTGGCG
GTGATTAGGG CTATGTCACA TGAGGTCATG GTTCTCAAAG GCGGCAAAGT GGTGGAGTTT
GGCGATACTG AAACCATGAT TAAGCATCCC CGCCAAACCT ATACAAAAGA GCTTATTGCG
GCTGCAGAGC TGACCTAA
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| Protein sequence | MSLLRYEDLC ISFGEGRREK FAVNHLDLEI GIGERVALVG ESGSGKTLTA LAPLRLESEG
AKVSGKILWN RKDGKGEVDL LSVPIQDIRE IRGREIAMVF QEPMTALNPL FTVGNQIIEA
VQIFQPLISK SDAIDAAVDL LRKTGIPEPE RRFHSYPHQL SGGQRQRAMI AMALACKPRL
LIADEPTTAL DVSLRLQILD LLKELQEESK DEGGMGILLI THDLNLVKHF AQRVAVLNQG
NLMESGSTKQ VFEHPEDPYT RALVNSEPIR DLVPLMPLAP VLLKTEELSV AYPSSESVSW
FKKAPPHKVL KKVSFALKQS QTIGVIGESG SGKTTLGMAV LGLLGDSSAE VSGDVDVLGN
DWQKLKPVER RALRSSLQVI FQDPFGSLSP RMNVLQIVSE GLDVHFPKLS TAERETRVVD
MLKEVGLDRS ALLRYPHEFS GGQRQRIAIA RALILRPQIL VLDEPTSALD VSIQKQVLAL
LAELQKKYNL AYLMISHDLA VIRAMSHEVM VLKGGKVVEF GDTETMIKHP RQTYTKELIA
AAELT
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