| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1094 |
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| Symbol | nusA |
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| ID | 6183545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 954403 |
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| End bp | 955884 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671704 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001797881 |
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| Protein GI | 171463768 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAG AAGTTCTCAT GTTGGCAGAC GCGTTAGCGC GTGAAAAGAA CGTTGGTCAA
GCTATCGTAT TCGAGGCGTT GGAGATGGCT TTGGCATCTG CAACTAAGAA GTGTTATGCA
ACGGAAGACG TGGATATCCG CGTTTCGATT GATCGCGAAA CTGGTGAATA CGAAACCTTC
CGTCGTTGGT TGGTTGTTCC TAATGAAGCC GGTTTGCAAG AGCCTGATAA AGAGATTCTG
CAATTTGAAG CTCAAGAACA ACTCGCTGAC ATGGAGGTTG GCGATTACAT CGAAGAGCAA
ATTGAATCTT TAGCTTTCGG TCGTATCGGC GCACAAGCTG CTAAGCAGGT GATATTGCAA
CGTATTCGTG ATGCTGAGCG TGAGCAAATT TTGAACGACC ACCTTGAGCG TGGCGAAAAA
GTCATGACCG GTACCGTTAA ACGCGCTGAC AAGAATGGCG TCATTATTGA ATCTGGTCGC
GTAGAGGCAT TGCTTCGTCG TGATCAAATG ATTCCAAAAG AGAACTTACG TTCTGGTGAC
CGCGTACGTG CATACATCCT CAAGGTGGAT CGTGAAGCTC GTGGCCCACA GATTGAGCTC
TCACGTACTT GCCCAGATTT TTTGATCAAA TTGTTTGAGA ATGAAGTTCC AGAGATGGAG
CAAGGCTTGT TAGAGATTAA GGGCGCCGCT CGAGATCCTG GTATCCGTGC AAAGATTGCC
GTAATTACTT ATGACAAACG AATCGACCCA ATTGGTACTT GCGTTGGTGT TCGTGGCACA
CGCGTTACTG CAGTGCGCAA TGAAGTAGCA GGTGAAGCAG TAGATATCGT GTTGTGGTCT
GAAGATCCAG CCCAGTTTGT GATTGGCGCT TTGGCCCCAG CCCAAGTCTC TTCTATCGTG
GTTGATGAAG AGCGTCACGC TATGGATGTA GTGGTGGATG AAGAGAACTT GGCAATTGCG
ATTGGCCGTA GTGGACAAAA CGTTCGTTTG GCGAGCGATT TAACCGGTTG GCAGATCAAT
ATCATGACAC CTGAAGAGTC TGCTGAGAAG ACCGAAAAAG AAGCCTCTTC TGTGCGCCAG
TTGTTTATGG ACAAATTGGA CGTAGACCAA GAAGTAGCTG ATATTTTGAT TGAAGAAGGT
TTCAACACAT TAGAAGAGGT GGCTTATGTG CCATTATCTG AAATGTTAGA GATTGATTCT
TTTGACAAAG ATACTGTAAA CGAGTTACGT ACACGTGCTC GTGATTCCTT GTTGACTATG
GAGTTGGCAA AAGAAGAGCG TATTGGCGAA GTTTCACAAG ACTTGCGCTC TTTAGAAGGA
ATGACCACAG AGTTGATTGC TAAGCTTGCT GACAATCAGG TACATACCCG TGACGACCTT
GCTGAACTGG CTGTTGATGA GCTGGTTGAG GCGACACAAA TTGACGAAGA AACTGCGAAA
ACGCTCATCA TGAAAGCGCG CGAACATTGG TTTACTTCAT GA
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| Protein sequence | MSREVLMLAD ALAREKNVGQ AIVFEALEMA LASATKKCYA TEDVDIRVSI DRETGEYETF
RRWLVVPNEA GLQEPDKEIL QFEAQEQLAD MEVGDYIEEQ IESLAFGRIG AQAAKQVILQ
RIRDAEREQI LNDHLERGEK VMTGTVKRAD KNGVIIESGR VEALLRRDQM IPKENLRSGD
RVRAYILKVD REARGPQIEL SRTCPDFLIK LFENEVPEME QGLLEIKGAA RDPGIRAKIA
VITYDKRIDP IGTCVGVRGT RVTAVRNEVA GEAVDIVLWS EDPAQFVIGA LAPAQVSSIV
VDEERHAMDV VVDEENLAIA IGRSGQNVRL ASDLTGWQIN IMTPEESAEK TEKEASSVRQ
LFMDKLDVDQ EVADILIEEG FNTLEEVAYV PLSEMLEIDS FDKDTVNELR TRARDSLLTM
ELAKEERIGE VSQDLRSLEG MTTELIAKLA DNQVHTRDDL AELAVDELVE ATQIDEETAK
TLIMKAREHW FTS
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