| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1093 |
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| Symbol | infB |
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| ID | 6183574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 951636 |
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| End bp | 954389 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671703 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001797880 |
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| Protein GI | 171463767 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAA CAGTAAAAGT ACTCGCTAAA GAATTGAAAC GTACCGCGCC AGACCTCTTG
GAGCAGTTGA AGGCGGCCGG TATTGAAAAA GGTTCTGAGG ACGATAGCAT TACCGAAAAG
GACAAAACTG TTCTGCTCGA GCATTTGCAA AAAGCGCATG GCAGTACAGA TACAGGCGCG
CGCAAAAAGA TTACTTTAAT CAAGCGCGAG AGCTCTGAAA TTCGTCAAGC AGACTCTGCT
GGACGTACAC GCACTGTACA AGTTGAAGTT CGTAAAAAGC GCGTACTGGT TAAAGCAGGT
GACAAAGCTC CTGAAGAAGT TGCAGCACAA CCAGTTAAGC AAGTTGCACC TGCTGCCCCG
GCTAAACCGG TTATTTCTGA AGAAGAGTTA GAGAAACGCG CGGCCGAGGC GACTCGTCAA
GCAGAGTTGC TTGCTCGTCA AGAAGCGGAA ATGAAGGCTG CTGAAGAAGC GCGTCAAAAA
GAAGTTACTG TTCCAGTGGT CAAAGAAGTT GCTCCAGTGG ATAAAGCTCC CGTTGCACCT
GCTGTTGCAG AGAAGAAGTT AGCGGCTGAT AAGGCCGCAA AAGATTTAGC TGCAAGCAAA
GAAAAAGAAT TGGCGGATAT TCGTGCGCGT CGTGCTGCTG CTGAAGCTGA AGCTTTGGCT
ATTCGCGACA TGATGAGTGC TCCTGCTCGT GTTCTGAAGG CGCCAAGTGA AGTTGCTGCT
GAAGAAGCCA AAAAAGGTAC TTTGCATAAG CCAGCAAAAG CTGAGGGCGC TGAAGATAAG
AAGAAGGCCG CTACTAAAGT TGGTGGCAAG ACCATTAAAT CTTCTGAAAC ATCATCGACG
TGGCAAGAAG AAGGCACCAG GAAGTCTGGT GGCTTAAAAA CCCGTGGCGA TACTTCTGGT
GGTGTTGGTG GTTGGCGCTC TGGTGGCGGT CGCAAGAAGC AGCGTCAAAT CGCTGAAGCC
AATGTCGATA CAAACTTCCA GGTTCCTATC GAGCCAGTGA TTCGCGATGT TCATGTCCCA
GAAACGATTA CTGTTGCTGA ATTAGCGCAT GCAATGGCAG TGAAGAGCGC AGAAGTGATT
AAGTTATTAA TGGGTATGGG CCAAATGGTC ACTATCAACC AAGTGCTTGA TCAAGATACT
GCAATGATCA TCGTTGAAGA AATGGGCCAT AAAGCGCATG CAGCGAAATT AGATGATCCT
GATTTGGATC TCGGTACCGA AGGTCATGAT GCCGAGTTAC TGCCGCGTCC ACCAGTTGTA
ACGGTGATGG GTCACGTTGA TCATGGTAAG ACTTCTTTAT TAGATAAGAT TCGTACAGCA
AAAGTCGCTA TTGGTGAAGT TGGTGGTATT ACACAGCACA TTGGCGCTTA CCACGTTGAA
ACACCCCGTG GCATGATTAC GTTCTTAGAT ACTCCGGGTC ACGAAGCCTT TACGGCAATG
CGTGCTCGCG GTGCCAAGGC AACCGATATT GTGATTTTGG TGGTCGCTGC TGATGATGGG
GTGATGCCGC AAACCAAAGA GGCTATTCAC CATGCTATCG CTGGCGGTGT TCCTTTGGTT
GTTGCAATTA ATAAGATTGA TAAGCCAGAA GCAAATTCTG AGCGCGTTAA AGCAGAATTG
GTTGCTGAGC AGGTTGTTCT TGAGGAATAC GGTGGCGATG TGCCATTTAT TCCAGTATCT
GCCAAAACTG GTGAAGGTAT TGATGCTCTA CTAGAGAACG TGCTTTTACA AGCGGAAATT
CTGGAGCTCA AGGCACCAAA AGAGGCGCCA GCGCAAGGCT TAGTCATCGA GGCTCGCCTG
GATAAGGGTA AAGGTCCAGT TGCAACTGTT TTGGTTCAAT CCGGTACGCT CAAGCGTGGC
GATATGTTGT TGGCTGGCTC TTCATTTGGT CGCGTACGCG CCATGATGGA TGAAAACGGC
AAGCCATGCA ACGAAGCTGG CCCTTCCATT CCCGTTGAGA TTCAAGGTTT GTCAGAAGTG
CCTGCGGCAG GCGAGGCGGT GCAAGTGATG CCTGATGAGC GTAAGGCCCG CGAGATTGCA
TTGTTCCGTC AAGGTAAATT CCGTGATGTG AAGTTAGCCA AGCAACAGGC CGTCAAACTA
GAAAACATGA TGGAAACCAT AGGTGAAGGA GCAATTGAAG CTAAATTGTT GCCACTCATC
ATCAAGGCAG ACGTTCAAGG CTCACAAGAA GCTTTGTCTC AATTATTGAT GAAGCTTTCT
ATTCCAGAGG TGAAGGTGCA AATCGTTCAT GCTGCGGTGG GTGGCATTAC TGAAACTGAC
GTGAACTTAG CGGTTGTTTC TAAGGCAGTC ATTATTGGCT TTAACTCTCG TGCAGATGCG
GCAGCGCGTA AGTTGGCTGA AAACAATGGT GTCGATATTC GTTATCACAA TATTATTTAT
GACGCTGTAG ATGAAGTGAA GTTAGCTTTG AGCGGTATGT TGATTCCAGG TAAGAAGGAA
GAGATCACTG GTCTGGTTGA GATTCGTCAG GTCTTCTTGG TATCTAAAGT TGGCGCGATT
GCGGGTTGCT TGGTTGTTGA CGGTATCGTT AAACGTACAT CAAGCGTTCG CCTCTTACGT
GACAACGTTG TTGTTTGGAC TGGTGAATTG GATTCTCTAA AGCGCTTCAA GGATGATGCT
AAAGAAGTTC GTGCCGGTGT TGAGTGCGGC TTGTCATTAA AAGGCTATAA CGACATCAAA
GAAGGCGATC AACTCGAGGT ATTCGAAGTA ACTGAAGTTG CTCGTTCACT TTAA
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| Protein sequence | MATTVKVLAK ELKRTAPDLL EQLKAAGIEK GSEDDSITEK DKTVLLEHLQ KAHGSTDTGA
RKKITLIKRE SSEIRQADSA GRTRTVQVEV RKKRVLVKAG DKAPEEVAAQ PVKQVAPAAP
AKPVISEEEL EKRAAEATRQ AELLARQEAE MKAAEEARQK EVTVPVVKEV APVDKAPVAP
AVAEKKLAAD KAAKDLAASK EKELADIRAR RAAAEAEALA IRDMMSAPAR VLKAPSEVAA
EEAKKGTLHK PAKAEGAEDK KKAATKVGGK TIKSSETSST WQEEGTRKSG GLKTRGDTSG
GVGGWRSGGG RKKQRQIAEA NVDTNFQVPI EPVIRDVHVP ETITVAELAH AMAVKSAEVI
KLLMGMGQMV TINQVLDQDT AMIIVEEMGH KAHAAKLDDP DLDLGTEGHD AELLPRPPVV
TVMGHVDHGK TSLLDKIRTA KVAIGEVGGI TQHIGAYHVE TPRGMITFLD TPGHEAFTAM
RARGAKATDI VILVVAADDG VMPQTKEAIH HAIAGGVPLV VAINKIDKPE ANSERVKAEL
VAEQVVLEEY GGDVPFIPVS AKTGEGIDAL LENVLLQAEI LELKAPKEAP AQGLVIEARL
DKGKGPVATV LVQSGTLKRG DMLLAGSSFG RVRAMMDENG KPCNEAGPSI PVEIQGLSEV
PAAGEAVQVM PDERKAREIA LFRQGKFRDV KLAKQQAVKL ENMMETIGEG AIEAKLLPLI
IKADVQGSQE ALSQLLMKLS IPEVKVQIVH AAVGGITETD VNLAVVSKAV IIGFNSRADA
AARKLAENNG VDIRYHNIIY DAVDEVKLAL SGMLIPGKKE EITGLVEIRQ VFLVSKVGAI
AGCLVVDGIV KRTSSVRLLR DNVVVWTGEL DSLKRFKDDA KEVRAGVECG LSLKGYNDIK
EGDQLEVFEV TEVARSL
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