| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1087 |
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| Symbol | |
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| ID | 6183477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 943610 |
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| End bp | 944905 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671698 |
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| Product | catalytic domain of components of various dehydrogenase complexes |
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| Protein accession | YP_001797875 |
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| Protein GI | 171463762 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.010541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAA TAATTGAAAT CAAAGTCCCG GATATCGGTG ACTACAAAGA TGTGCCGGTA
ATCGAAGTCT TGGTGAAGGC TGGAGACAAG ATTGAAAAAG AGCAATCCAT TGTTGTTTTA
GAGTCTGACA AAGCCACGAT GGATGTTCCT TCTTCACACT CTGGTGTAGC GAAAGAAGTC
AGAGTTAAAG TAGGCGATAA CCTCTCTGAA GGATCGGTTG TTGTGGTCTT GGAGGGTGGG
GCATCTGGTG CATCGACTCC TGTTTCGACA CCTGCGGCTG CTCCCACGGC GCCAGCGGCA
AAGGTGGTTG AGCCTCCGAT TGCAAGAGCG CTAGCACCAC CCCCAATTAG CAACACTCCT
CCGCCTGTAG ACACGGCCGT GAGTCACGCA AGCCCATCTG TGCGCAAGTT TGCGCGAGAG
CTTGGCGCGA CAGTTGCTCA AGTTAAAGGC TCGGGTCCAA AAGGTCGCAT TACTCAGGAG
GACGTTCAGG CGTTTGTCAA AGCGGCTATG AGTGGCGGAG CAGGTAGTCC TGCGGCAGCT
TCAATTGGTG GCAGTTTAGG CGGCTTGAAT TTGATTCCTT GGCCAAAAGT CGATTTCACG
AAGTTTGGTG AGATAGAGCG TCAACCATTA AATCGAATTA AGAAACTCAC TGCAGCCAAC
TTGGGGCGTA ACTGGGTGAT GATTCCAGCT GTGACGTATC ACGAAGACGC AGACATTACT
GACTTGGAGG CCTTCCGCAT TCTCACGAAT AAAGAGAATG AGAAGAGGGG CATTAAGATC
ACGATGCTCG CTTTCTTAAT GAAAGCTGCA GTTGCGGCTC TGAAAAAATA TCCAGAGTTC
AATAGTTCTC TGGATGGTGA CGACCTCATA TTGAAGAAAT ACTTCAATAT TGGTTTTGCA
GCGGATACGC CAACAGGATT GGTTGTGCCG GTAATTAAAG ATGCGGATAA AAAAGGCATC
TTCGAGTTGG CCAAAGAGAC TTCAGACTTA GCTACATTAG CACGTGATGG CAAATTAAAA
CCAGATCAAA TGCAGGGTGC TAGCTTTACG ATCTCATCTT TGGGTGGTAT TGGTGGTACG
TATTTCTCAC CAATCGTCAA TGCTCCTGAA GTTGCCATCA TGGGTGTGAG CAAGGCATCT
ATGAAGCCAG TTTGGGATGG CAAGCAGTTT GTGCCACGCC TCATTTGCCC ATTATCTTTA
TCTGCGGATC ATCGCGTGAT TGACGGTGCC TTGGCTACTC GCTTTAACGT GTACATTGCT
CAGCTCTTAG CCGACTTCCG TCGCGCTAGT CTGTAA
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| Protein sequence | MSQIIEIKVP DIGDYKDVPV IEVLVKAGDK IEKEQSIVVL ESDKATMDVP SSHSGVAKEV
RVKVGDNLSE GSVVVVLEGG ASGASTPVST PAAAPTAPAA KVVEPPIARA LAPPPISNTP
PPVDTAVSHA SPSVRKFARE LGATVAQVKG SGPKGRITQE DVQAFVKAAM SGGAGSPAAA
SIGGSLGGLN LIPWPKVDFT KFGEIERQPL NRIKKLTAAN LGRNWVMIPA VTYHEDADIT
DLEAFRILTN KENEKRGIKI TMLAFLMKAA VAALKKYPEF NSSLDGDDLI LKKYFNIGFA
ADTPTGLVVP VIKDADKKGI FELAKETSDL ATLARDGKLK PDQMQGASFT ISSLGGIGGT
YFSPIVNAPE VAIMGVSKAS MKPVWDGKQF VPRLICPLSL SADHRVIDGA LATRFNVYIA
QLLADFRRAS L
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