| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1078 |
|---|
| Symbol | aat |
|---|
| ID | 6183239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 935514 |
|---|
| End bp | 936251 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641671689 |
|---|
| Product | leucyl/phenylalanyl-tRNA--protein transferase |
|---|
| Protein accession | YP_001797866 |
|---|
| Protein GI | 171463753 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2360] Leu/Phe-tRNA-protein transferase |
|---|
| TIGRFAM ID | [TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.493539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 0.119726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCAGA TTGCCTGGCT AGGGCCTAAT GACCCCTTTC CAAACCCCCT CACTGAAGCT
GATCCAGACT CCAGCGCCCC TGGTTTAATA GCCGTCAGCG AGCGGATTTA CCCTGGGCAA
CTGTCTCGCG CTTATCAACA AGGGATCTTT CCCTGGTACT CCGATAATCA ACCTGTTTTA
TGGTGGTCAC CAGACCCTAG GATGGTGCTA AAGCCAACAG AATTTAAATG TAGCGAGTCT
TTGCGCAAAA TTATTCGCCT CTTTTGTCAA AACCCTCAAT CTCAAATACA GGTAGATGTT
GATTTTGGGG CGGTCATACG CTCTTGTGCA ACAAGCGCTC GCAAAGATCA GGATAGTACC
TGGATCACCC ATGAGATCAT CGACACCTAC ACCGCCCTTC ACGAACAAGG AAATGCGCAC
GGCATCGCTG TAATAGAAGA AGGCCAGCTA ATGGGTGGGC TTTATTGCGT TTCTTTTGGG
GGTATAGTTT TTGGTGAGTC CATGTTTAGT CACAAGACCA ATACCTCCAA AATAGCCTTG
GCAGCGCTAA GCTCTTGGTG CCTACTAAAT AATGTCCCAA TGATCGATTG CCAACAAGAG
ACGGCCCACC TACTTTCCTT AGGCGCCGCG CCTATATCTC GACAAAATTT TTTAGAGCAA
CTGCAAATAT CCTTAACTCA AACTAAGATT GAGAAATCCT GGACTTTTGA TAAAACAATC
TTGCATCACT GGCTATGA
|
|---|
| Protein sequence | MGQIAWLGPN DPFPNPLTEA DPDSSAPGLI AVSERIYPGQ LSRAYQQGIF PWYSDNQPVL
WWSPDPRMVL KPTEFKCSES LRKIIRLFCQ NPQSQIQVDV DFGAVIRSCA TSARKDQDST
WITHEIIDTY TALHEQGNAH GIAVIEEGQL MGGLYCVSFG GIVFGESMFS HKTNTSKIAL
AALSSWCLLN NVPMIDCQQE TAHLLSLGAA PISRQNFLEQ LQISLTQTKI EKSWTFDKTI
LHHWL
|
|---|
| |