Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1073 |
Symbol | |
ID | 6183576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 932478 |
End bp | 933053 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641671685 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_001797862 |
Protein GI | 171463749 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.626374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.148013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGC TATTAGCCAC CCTCTTTGTT ACCGCCTCCT GCTTTATCGC TCAAGCAGCA TTTGCGGAAC CGAAGGTGGA ATTTAAAACA ACCATGGGTA ATTTCGTGGT GGAGCTAGAT GACGTTAAAG CGCCAAAGAC AACTGCCAAC TTTTTGAATT ACGTAAAAAG TGGTTTTTAT AACGGCACCG TCTTTCATCG TGTGATTGAT GGCTTCATGA TTCAAGGTGG CGGCTTTACC GCAGACTTAA ATCAGAAACC AACCAATGCA CCAGTAGTTT CTGAAGCACA AAACGGCTTA AAAAATAACG CTTATACGAT TGCGATGGCC CGTACATCTG ATCCAGATTC AGCTACCTCA CAGTTTTTTA TTAACGTCAA AGACAATGCC GCATTGGACT ACCCTAATGC AATGGGTAAC GGTTACACCG TTTTTGGCAA GGTGATTTCT GGAACCCAAA CCATCGATGC AATTCGAAAG GTACCAACTA TGATTGCACC TGCACCACGT ATGGGCAGAA TGGCTGACGT CCCAAGTCAG ACCGTCACTA TCGAATCAGC AACTATTCTG AAGTAA
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Protein sequence | MRKLLATLFV TASCFIAQAA FAEPKVEFKT TMGNFVVELD DVKAPKTTAN FLNYVKSGFY NGTVFHRVID GFMIQGGGFT ADLNQKPTNA PVVSEAQNGL KNNAYTIAMA RTSDPDSATS QFFINVKDNA ALDYPNAMGN GYTVFGKVIS GTQTIDAIRK VPTMIAPAPR MGRMADVPSQ TVTIESATIL K
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